RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 KDM7AQ6ZMT4 941 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 OR10T2Q8NGX3 314 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 TMEM209Q96SK2 561 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 NRDE2Q9H7Z3 1164 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 LRRC4CQ9HCJ2 640 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 TBC1D13Q9NVG8 400 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 TMLHEQ9NVH6 421 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 TMEM161AQ9NX61 479 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 CALCOCO1Q9P1Z2 691 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 FZD10Q9ULW2 581 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 NOVA2Q9UNW9 492 aaKnown RBP17.27■□□□□ 0.36
PCM1-206ENST00000518537 NAALADL1Q9UQQ1 740 aa17.27■□□□□ 0.36
PCM1-206ENST00000518537 YJEFN3A6XGL0 299 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 E7ENQ6 273 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 B4GALT3O60512 393 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 ZBED1O96006 694 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 ZFXP17010 805 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 STIP1P31948 543 aaKnown RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 PITX1P78337 314 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 YWHAHQ04917 246 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 KYNUQ16719 465 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 COLGALT2Q8IYK4 626 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 NT5C3BQ969T7 300 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 RBM15Q96T37 977 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCM1-206ENST00000518537 PKMYT1Q99640 499 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 TMEM109Q9BVC6 243 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 DMAP1Q9NPF5 467 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 NINJ2Q9NZG7 142 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 SHOC2Q9UQ13 582 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 SMIM23A6NLE4 172 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 NBNO60934 754 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 LTFP02788 710 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 COL6A1P12109 1028 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 ARL4AP40617 200 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 NME3Q13232 169 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 C6orf118Q5T5N4 469 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 OTUD1Q5VV17 481 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 B4GALNT4Q76KP1 1039 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 PSTKQ8IV42 348 aaKnown RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 PPIL6Q8IXY8 311 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
PCM1-206ENST00000518537 DBF4BQ8NFT6 615 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 CAPS2Q9BXY5 557 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 MAGEB5Q9BZ81 275 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 MTMR10Q9NXD2 777 aa17.26■□□□□ 0.35
PCM1-206ENST00000518537 PCNTO95613 3336 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 HPDP32754 393 aaPredicted RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 LRRTM3Q86VH5 581 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 RELL1Q8IUW5 271 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 ABI1Q8IZP0 508 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 ARFGAP2Q8N6H7 521 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 SLC7A14Q8TBB6 771 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 DEFB118Q96PH6 123 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 CSPG4P5Q96PW8 444 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 SAYSD1Q9NPB0 183 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 PRG3Q9Y2Y8 225 aaPredicted RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 PCDHB7Q9Y5E2 793 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 TMEM189-UBE2V1I3L0A0 370 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 ENPP3O14638 875 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 RASGRF2O14827 1237 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 FYNP06241 537 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 NCAM1P13591 858 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 MAGEA4P43358 317 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 PLEKHG4Q58EX7 1191 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 C4orf50Q6ZRC1 276 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 BNIPLQ7Z465 357 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 SPATA2LQ8IUW3 424 aaPredicted RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 PYROXD2Q8N2H3 581 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 SEPT8Q92599 483 aa17.25■□□□□ 0.35
PCM1-206ENST00000518537 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 ROPN1BQ9BZX4 212 aaPredicted RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 ROPN1Q9HAT0 212 aaPredicted RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 CWC15Q9P013 229 aaKnown RBP17.25■□□□□ 0.35
PCM1-206ENST00000518537 CFAP69A5D8W1 941 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 RGS16O15492 202 aaPredicted RBP17.24■□□□□ 0.35
PCM1-206ENST00000518537 ACTN2P35609 894 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 MAGOHP61326 146 aaKnown RBP17.24■□□□□ 0.35
PCM1-206ENST00000518537 EMC10Q5UCC4 262 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 TAB3Q8N5C8 712 aaPredicted RBP17.24■□□□□ 0.35
PCM1-206ENST00000518537 EPS8L3Q8TE67 593 aaKnown RBP17.24■□□□□ 0.35
PCM1-206ENST00000518537 IRGQQ8WZA9 623 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 PGM2Q96G03 612 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 C9orf72Q96LT7 481 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 RRN3Q9NYV6 651 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 RCOR3Q9P2K3 495 aaPredicted RBP17.24■□□□□ 0.35
PCM1-206ENST00000518537 DNAJB4Q9UDY4 337 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 LRFN2Q9ULH4 789 aa17.24■□□□□ 0.35
PCM1-206ENST00000518537 FARP1Q9Y4F1 1045 aaPredicted RBP17.24■□□□□ 0.35
PCM1-206ENST00000518537 KCNN4O15554 427 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 TRAPPC3O43617 180 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 TADA2AO75478 443 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 GOT1P17174 413 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 AMPD1P23109 780 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 EFHC2Q5JST6 749 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 CENPUQ71F23 418 aa17.23■□□□□ 0.35
PCM1-206ENST00000518537 CTU1Q7Z7A3 348 aaKnown RBP17.23■□□□□ 0.35
PCM1-206ENST00000518537 CDKL3Q8IVW4 592 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms