RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 SYNJ2BP-COX16A0A087WUM0 186 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 A0A1W2PPC1 479 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 ARL5CA6NH57 179 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 GOLGA8MH3BSY2 632 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 HCRTO43612 131 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 FAM107AO95990 144 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CHN1P15882 459 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 KRT15P19012 456 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 LMO2P25791 158 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CD52P31358 61 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 MATKP42679 507 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 TKTL1P51854 596 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 TSPY1Q01534 308 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 AUHQ13825 339 aaKnown RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 TAF5Q15542 800 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 MAPRE1Q15691 268 aaKnown RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 SEPT7Q16181 437 aaKnown RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 ARL13BQ3SXY8 428 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 BBS9Q3SYG4 887 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CCDC38Q502W7 563 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 DCAF6Q58WW2 860 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 CAPN12Q6ZSI9 719 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 ARHGEF18Q6ZSZ5 1173 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 PDZD4Q76G19 769 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 PRUNE1Q86TP1 453 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 RPAINQ86UA6 219 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 FAM35AQ86V20 835 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 PALM2Q8IXS6 379 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 TAB3Q8N5C8 712 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 ARRDC4Q8NCT1 418 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 MYCBPAPQ8TBZ2 947 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 ZNF473Q8WTR7 871 aaKnown RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 LPPQ93052 612 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 PIWIL1Q96J94 861 aaKnown RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 GLT1D1Q96MS3 346 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 XPO6Q96QU8 1125 aaKnown RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 B3GNT5Q9BYG0 378 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 COX16Q9P0S2 106 aa11.19□□□□□ -0.62
SPIDR-204ENST00000517824 SAE1Q9UBE0 346 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-204ENST00000517824 SPTBN5Q9NRC6 3674 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 POC1B-GALNT4F8VUJ3 575 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 ADAMTS4O75173 837 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SPAG6O75602 509 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 TCEA3O75764 348 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 CHRNA1P02708 482 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 TSHRP16473 764 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 TKTP29401 623 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 NOS2P35228 1153 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 RPL22P35268 128 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 NR2C2P49116 596 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 CLCNKBP51801 687 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 MAP3K7CLP57077 242 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 YWHAZP63104 245 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SARNPP82979 210 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 MGAT3Q09327 533 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 ITGA7Q13683 1181 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SLC25A52Q3SY17 297 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 ZC3H12AQ5D1E8 599 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 ZNF618Q5T7W0 954 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 GKAP1Q5VSY0 366 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 HEATR6Q6AI08 1181 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 TRNP1Q6NT89 227 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 GLB1LQ6UWU2 654 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 NPNTQ6UXI9 565 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 NECAB2Q7Z6G3 386 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 PSTKQ8IV42 348 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 CACNA2D3Q8IZS8 1091 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 DEFB106AQ8N104 65 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 ANKS4BQ8N8V4 417 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 ANKRD42Q8N9B4 389 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 MGARPQ8TDB4 240 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 CLEC4CQ8WTT0 213 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 KCTD13Q8WZ19 329 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 CENPTQ96BT3 561 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 LPIN3Q9BQK8 851 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 NRDE2Q9H7Z3 1164 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 RRN3Q9NYV6 651 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SENP1Q9P0U3 644 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SAMD15Q9P1V8 674 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 RCOR3Q9P2K3 495 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 PSMC3IPQ9P2W1 217 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 TBK1Q9UHD2 729 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 DDX20Q9UHI6 824 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 LGALS13Q9UHV8 139 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 SLC12A6Q9UHW9 1150 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 PADI3Q9ULW8 664 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 RRP15Q9Y3B9 282 aaKnown RBP11.18□□□□□ -0.62
SPIDR-204ENST00000517824 PLXNA3P51805 1871 aa11.18□□□□□ -0.62
SPIDR-204ENST00000517824 EYSQ5T1H1 3165 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms