RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 PCOLCE2Q9UKZ9 415 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 KCNH3Q9ULD8 1083 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PIN4Q9Y237 131 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 LRCH1Q9Y2L9 728 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 EMC9Q9Y3B6 208 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PCDHB7Q9Y5E2 793 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MYH7BA7E2Y1 1941 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 KIAA1217Q5T5P2 1943 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 A0A1W2PPC1 479 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 F8W735 103 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 K7ERI5 159 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SLC16A4O15374 487 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 B4GALT5O43286 388 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 DLX3O60479 287 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MGEA5O60502 916 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 LRIG2O94898 1065 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SLITRK5O94991 958 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 HNRNPCP07910 306 aaKnown RBP eCLIP2.97□□□□□ -1.93
SKP1-204ENST00000517691 STAG3L1P0CL83 205 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PLS3P13797 630 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MYOGP15173 224 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PFKFB1P16118 471 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CMA1P23946 247 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NOS3P29474 1203 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 IGFALSP35858 605 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PIK3CBP42338 1070 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MATR3P43243 847 aaKnown RBP eCLIP2.97□□□□□ -1.93
SKP1-204ENST00000517691 SYKP43405 635 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NAMPTP43490 491 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 AFMP43652 599 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NPTX2P47972 431 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NDUFA8P51970 172 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 EFNA5P52803 228 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ZNF445P59923 1031 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SUMO1P63165 101 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 CYP4F3Q08477 520 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PRPF4BQ13523 1007 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 SEMA5AQ13591 1074 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 GIT2Q14161 759 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TAF5Q15542 800 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SLC14A2Q15849 920 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CCNG2Q16589 344 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MAPK6Q16659 721 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ANO4Q32M45 955 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 HERC4Q5GLZ8 1057 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 RESP18Q5W5W9 173 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ADALQ6DHV7 355 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TWF2Q6IBS0 349 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 IQCEQ6IPM2 695 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ABHD17CQ6PCB6 329 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TMCO3Q6UWJ1 677 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 C4orf50Q6ZRC1 276 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SLC24A5Q71RS6 500 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CBLL1Q75N03 491 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RTN4RL1Q86UN2 441 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 CDH24Q86UP0 819 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 FAM228AQ86W67 206 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 HEATR4Q86WZ0 1026 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 HERC6Q8IVU3 1022 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 NRSN1Q8IZ57 195 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 OR2C3Q8N628 320 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 FSIP1Q8NA03 581 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MFSD2AQ8NA29 543 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CLRN3Q8NCR9 226 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 BVESQ8NE79 360 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PHOSPHO2Q8TCD6 241 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ZFPM2Q8WW38 1151 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 DIO2Q92813 273 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CENPTQ96BT3 561 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RCC1LQ96I51 464 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 CPB2Q96IY4 423 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 FBXL18Q96ME1 805 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RAD9AQ99638 391 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 REEP2Q9BRK0 252 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 DESI2Q9BSY9 194 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TCHPQ9BT92 498 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 KIFC3Q9BVG8 833 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TIPINQ9BVW5 301 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TRIM6Q9C030 488 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 MRPL18Q9H0U6 180 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 C2orf40Q9H1Z8 148 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PRO3102Q9H379 93 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ELAC1Q9H777 363 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 MINDY3Q9H8M7 445 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SLC28A3Q9HAS3 691 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 PIDD1Q9HB75 910 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 ARFGAP3Q9NP61 516 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RGS18Q9NS28 235 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SPTLC3Q9NUV7 552 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 MKS1Q9NXB0 559 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 KCND2Q9NZV8 630 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 TBC1D7Q9P0N9 293 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 WHRNQ9P202 907 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 LARSQ9P2J5 1176 aaKnown RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 NFKBIL1Q9UBC1 381 aaPredicted RBP2.97□□□□□ -1.93
SKP1-204ENST00000517691 MAFFQ9ULX9 164 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 RABL2BQ9UNT1 228 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 SQORQ9Y6N5 450 aa2.97□□□□□ -1.93
SKP1-204ENST00000517691 CEP290O15078 2479 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 FRMPD3Q5JV73 1810 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms