RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 HOXD13P35453 343 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 CARSP49589 748 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 VPS41P49754 854 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MTHFSP49914 203 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DRG2P55039 364 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP2R2BQ00005 443 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 IL9RQ01113 521 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 BNC1Q01954 994 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRR1Q13601 381 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 GNA13Q14344 377 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MTF1Q14872 753 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ACAP2Q15057 778 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 STILQ15468 1287 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAPRE1Q15691 268 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNJ8Q15842 424 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SHROOM1Q2M3G4 852 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRIM16LQ309B1 348 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 EDRF1Q3B7T1 1238 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 WDR72Q3MJ13 1102 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MMEL1Q495T6 779 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MTERF2Q49AM1 385 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANKRD20A4Q4UJ75 823 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC45A4Q5BKX6 768 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 C12orf60Q5U649 245 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 C9orf131Q5VYM1 1079 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 IQSEC1Q6DN90 963 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZCCHC8Q6NZY4 707 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 TTC27Q6P3X3 843 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM173BQ6P4H8 233 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SYCE2Q6PIF2 218 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DBX2Q6ZNG2 339 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PTF1AQ7RTS3 328 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 RASSF3Q86WH2 238 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC25Q86WR0 208 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PALB2Q86YC2 1186 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 GSPT2Q8IYD1 628 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 AADATQ8N5Z0 425 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NECAB1Q8N987 351 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 USP38Q8NB14 1042 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PDPRQ8NCN5 879 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SHCBP1Q8NEM2 672 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 OR10Z1Q8NGY1 313 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DNAJB8Q8NHS0 232 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PIWIL2Q8TC59 973 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 HCAR2Q8TDS4 363 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 CYB5D2Q8WUJ1 264 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 CPLX3Q8WVH0 158 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRUB1Q8WWH5 349 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SEPT8Q92599 483 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAP4K1Q92918 833 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SGK3Q96BR1 496 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 HSPBAP1Q96EW2 488 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 EAF1Q96JC9 268 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC74BQ96LY2 380 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAGEB18Q96M61 343 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NLRP4Q96MN2 994 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NEUROD6Q96NK8 337 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SERPINB12Q96P63 405 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DNAJC7Q99615 494 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYD88Q99836 296 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SELENOSQ9BQE4 189 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 BTBD10Q9BSF8 475 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 IER2Q9BTL4 223 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 C1orf50Q9BV19 199 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 GON7Q9BXV9 100 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 OR2B2Q9GZK3 357 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 KLC2Q9H0B6 622 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADAMTS10Q9H324 1103 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 EPB41L4BQ9H329 900 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SNX25Q9H3E2 840 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DENND2DQ9H6A0 471 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SP140LQ9H930 580 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SP110Q9HB58 689 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF287Q9HBT7 754 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAGEE1Q9HCI5 957 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DCP1AQ9NPI6 582 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZC4H2Q9NQZ6 224 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 INTS13Q9NVM9 706 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NKIRAS1Q9NYS0 192 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 EHD2Q9NZN4 543 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 HMGXB4Q9UGU5 601 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 BCAP29Q9UHQ4 241 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 CAPN11Q9UMQ6 739 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM5Q9Y2B1 443 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 TDRKHQ9Y2W6 561 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 AP4S1Q9Y587 144 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCDHB6Q9Y5E3 794 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 A0A1W2PP64 1363 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF536O15090 1300 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ACEP12821 1306 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRR36Q9H6K5 1346 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADGRB3O60242 1522 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 NESP48681 1621 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SETD1AO15047 1707 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZSCAN5BA6NJL1 495 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 OR6C65A6NJZ3 312 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SMIM23A6NLE4 172 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRPC5OSA6NMA1 111 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 OR5K4A6NMS3 321 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms