RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CHST9Q7L1S5 443 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 KCTD20Q7Z5Y7 419 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 USP37Q86T82 979 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ANKRD35Q8N283 1001 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 DPP10Q8N608 796 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 REPS2Q8NFH8 660 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 KIF18AQ8NI77 898 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SPATA20Q8TB22 786 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 KCNE4Q8WWG9 221 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SEC14L1Q92503 715 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MRPS27Q92552 414 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 EZH1Q92800 747 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FAM162AQ96A26 154 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SYAP1Q96A49 352 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 TRIM44Q96DX7 344 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 DYDC2Q96IM9 177 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 UROC1Q96N76 676 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 NR1H4Q96RI1 486 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 TTPALQ9BTX7 342 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MECRQ9BV79 373 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FAM129AQ9BZQ8 928 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 KRT23Q9C075 422 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 MRPL18Q9H0U6 180 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SLC25A32Q9H2D1 315 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 UNKLQ9H9P5 680 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FSCN3Q9NQT6 498 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 GIMAP4Q9NUV9 329 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 DDX43Q9NXZ2 648 aaKnown RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 KCND2Q9NZV8 630 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 CFAP97Q9P2B7 532 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF624Q9P2J8 865 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 SLC25A10Q9UBX3 287 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 RGS17Q9UGC6 210 aaPredicted RBP4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 LAMP5Q9UJQ1 280 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 HPSEQ9Y251 543 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 FPGT-TNNI3KV9GXZ4 949 aa4.21□□□□□ -1.74
RNU4-60P-201ENST00000517239 BTBD18B2RXH4 712 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 AKR1B15C9JRZ8 316 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 H0Y858 1186 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 H3BS24 57 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 DNM1LO00429 736 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 BCAT2O15382 392 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 ADCY6O43306 1168 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 TNFSF14O43557 240 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 OLFM2O95897 454 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 LMNAP02545 664 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 GLI1P08151 1106 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PDHA1P08559 390 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 ELNP15502 786 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PTAFRP25105 342 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PBX3P40426 434 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SMCPP49901 116 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 GPC3P51654 580 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 CDH8P55286 799 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SH3BGRP55822 239 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 WNT3AP56704 352 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 RPL7AP62424 266 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 MRPS5P82675 430 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 KRT17Q04695 432 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 EGR3Q06889 387 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SF3A3Q12874 501 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 GPS1Q13098 491 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 COL9A3Q14050 684 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 BOP1Q14137 746 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 DGKDQ16760 1214 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 INSCQ1MX18 579 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 GAB4Q2WGN9 574 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 NRN1LQ496H8 165 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PABPC1LQ4VXU2 614 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PLA1AQ53H76 456 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 NHSL2Q5HYW2 709 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 CACHD1Q5VU97 1274 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 OLFML2BQ68BL8 750 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 TMEM154Q6P9G4 183 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 FAM111BQ6SJ93 734 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SUSD1Q6UWL2 747 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 TMC5Q6UXY8 1006 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 UBE3BQ7Z3V4 1068 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 ADGRG6Q86SQ4 1221 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 MIB1Q86YT6 1006 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PEX5LQ8IYB4 626 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 FMR1NBQ8N0W7 255 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SIX6OS1Q8N1H7 587 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF480Q8WV37 535 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PRPF31Q8WWY3 499 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 ARHGEF2Q92974 986 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SAT2Q96F10 170 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 BTBD6Q96KE9 485 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 HSPA12BQ96MM6 686 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PPP1R10Q96QC0 940 aaKnown RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 PRAM1Q96QH2 718 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 WDR24Q96S15 920 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 NAA11Q9BSU3 229 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SPXQ9BT56 116 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 C11orf54Q9H0W9 315 aaPredicted RBP4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 MROH8Q9H579 483 aa4.2□□□□□ -1.74
RNU4-60P-201ENST00000517239 SH2D4AQ9H788 454 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms