RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MAB21L3Q8N8X9 362 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 GPR156Q8NFN8 814 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 NLGN4YQ8NFZ3 816 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 SCLYQ96I15 445 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 RADILQ96JH8 1075 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 ADGRG7Q96K78 797 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 PRR25Q96S07 402 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 EVA1AQ9H8M9 152 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 TMEM140Q9NV12 185 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 ACTR10Q9NZ32 417 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 OGFRQ9NZT2 677 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 LPAR3Q9UBY5 353 aa-0.36□□□□□ -2.47
RNU6-539P-201ENST00000516665 PTPDC1A2A3K4 754 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 MCIDASD6RGH6 385 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 NR5A2O00482 541 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 GPR32O75388 356 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 CYP1A2P05177 515 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 EDN1P05305 212 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 MARK3P27448 753 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 SLC6A9P48067 706 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 CLCN3P51790 818 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 GYS2P54840 703 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 PER3P56645 1201 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 GABREP78334 506 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 ATP8B2P98198 1209 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 SNTA1Q13424 505 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 KCNB1Q14721 858 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 TDRD12Q587J7 1177 aaKnown RBP-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 NSUN5P2Q63ZY6 315 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 TCP11L2Q8N4U5 519 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 BCAS4Q8TDM0 211 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZNF473Q8WTR7 871 aaKnown RBP-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 POM121L2Q96KW2 1035 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 ASCL2Q99929 193 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 OPRPNQ99935 248 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 ORAI3Q9BRQ5 295 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 ERVMER34-1Q9H9K5 563 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 SLC52A2Q9HAB3 445 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 TOMM22Q9NS69 142 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 MALT1Q9UDY8 824 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 MSRAQ9UJ68 235 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 EDARQ9UNE0 448 aa-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 TDRD6O60522 2096 aaKnown RBP-0.37□□□□□ -2.47
RNU6-539P-201ENST00000516665 KMT2BQ9UMN6 2715 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 CBX4O00257 560 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 MDM4O15151 490 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 MGMTP16455 207 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 XGP55808 180 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 POU5F1Q01860 360 aaKnown RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 HLFQ16534 295 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 FAM209AQ5JX71 171 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 C6orf10Q5SRN2 563 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 ICE2Q659A1 982 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 PARM1Q6UWI2 310 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 HPS6Q86YV9 775 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 C16orf71Q8IYS4 520 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 CHST14Q8NCH0 376 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 SECTM1Q8WVN6 248 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 SOCS4Q8WXH5 440 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 RTN4RQ9BZR6 473 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 NUAK2Q9H093 628 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 C11orf54Q9H0W9 315 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 OSBPL2Q9H1P3 480 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 AAMDCQ9H7C9 122 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 MOV10Q9HCE1 1003 aaKnown RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 AGO4Q9HCK5 861 aaKnown RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 KRCC1Q9NPI7 259 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 GAR1Q9NY12 217 aaKnown RBP-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 AMFRQ9UKV5 643 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 POMT2Q9UKY4 750 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZDHHC8Q9ULC8 765 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 MAFFQ9ULX9 164 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 B3GNT3Q9Y2A9 372 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 SPO11Q9Y5K1 396 aa-0.38□□□□□ -2.47
RNU6-539P-201ENST00000516665 KIR2DS5A0A0G2JLQ3 304 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 PMS2P5A8MQ11 134 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 RSPH10B2B2RC85 870 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 I6L893 689 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 KIR2DS3K7RE56 304 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 CLGNO14967 610 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 HNRNPDLO14979 420 aaKnown RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 GRM6O15303 877 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 PRPF4O43172 522 aaKnown RBP eCLIP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 GLRX3O76003 335 aaKnown RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 RSPH10BP0C881 870 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 PHKG2P15735 406 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 CEBPBP17676 345 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 LIMK2P53671 638 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 CREMQ03060 361 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 MRPL58Q14197 206 aaKnown RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 KPNB1Q14974 876 aaKnown RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 DLGAP5Q15398 846 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 FAM110CQ1W6H9 321 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 DALRD3Q5D0E6 543 aaKnown RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZNF776Q68DI1 518 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 FAAP20Q6NZ36 180 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 VSTM1Q6UX27 236 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 TMEM108Q6UXF1 575 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZNF365Q70YC5 407 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 TFAP2DQ7Z6R9 452 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms