RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ZNF487B1APH4 448 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 C2CD2LO14523 706 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ADAM12O43184 909 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CST8O60676 142 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RTN3O95197 1032 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ECEL1O95672 775 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GAS8O95995 478 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 F9P00740 461 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HAPLN1P10915 354 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RPL17P18621 184 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GBP1P32455 592 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 OR1D2P34982 312 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PTGIRP43119 386 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 KCNJ1P48048 391 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TUFMP49411 452 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GPR15P49685 360 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ARSEP51690 589 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ATXN1P54253 815 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 EPHB4P54760 987 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 AIF1P55008 147 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DYNLT1P63172 113 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PITX1P78337 314 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 RBM10P98175 930 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 LMNB2Q03252 620 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 KRT17Q04695 432 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ADCY2Q08462 1091 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DUSP4Q13115 394 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CUL1Q13616 776 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DPYSL3Q14195 570 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PPP1R7Q15435 360 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DPYSL2Q16555 572 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PPP6R3Q5H9R7 873 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 EFHC2Q5JST6 749 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TMEM240Q5SV17 173 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SDHAF4Q5VUM1 108 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BTBD8Q5XKL5 378 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TPGS2Q68CL5 300 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CCNI2Q6ZMN8 369 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DENND5BQ6ZUT9 1274 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SYDE1Q6ZW31 735 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BBS12Q6ZW61 710 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BNIPLQ7Z465 357 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 MON1AQ86VX9 555 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FAM131BQ86XD5 332 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 VSIG1Q86XK7 387 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 JAMLQ86YT9 394 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TTC9BQ8N6N2 239 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CCDC185Q8N715 623 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TTC13Q8NBP0 860 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ATL2Q8NHH9 583 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FAM71BQ8TC56 605 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 IFT81Q8WYA0 676 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ATG4AQ8WYN0 398 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HERVK_113Q902F9 699 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 EDEM1Q92611 657 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 NTAN1Q96AB6 310 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PGAP3Q96FM1 320 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SPATA17Q96L03 361 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CCDC114Q96M63 670 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SLC9A7Q96T83 725 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 LBHD1Q9BQE6 289 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ERP44Q9BS26 406 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ZNF670Q9BS34 389 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FRMD8P1Q9BZ68 369 aaPredicted RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 MTIF3Q9H2K0 278 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PCDH18Q9HCL0 1135 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PIGVQ9NUD9 493 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 COMMD8Q9NX08 183 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 DDIT4Q9NX09 232 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 COX16Q9P0S2 106 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 STK39Q9UEW8 545 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 AFF4Q9UHB7 1163 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SCML2Q9UQR0 700 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 R3HDM2Q9Y2K5 976 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 INSL6Q9Y581 213 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SLC4A7Q9Y6M7 1214 aa7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 MKI67P46013 3256 aaKnown RBP7.95□□□□□ -1.14
SCARNA20.1-201ENST00000516009 GBF1Q92538 1859 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ESYT3A0FGR9 886 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BHMG1C9JSJ3 638 aaPredicted RBP7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 H3BRJ5 948 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 APOC4-APOC2K7ER74 178 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 LIASO43766 372 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SOAT2O75908 522 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 FGF18O76093 207 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 VNN2O95498 520 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 APOC2P02655 101 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 SYN1P17600 705 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 YWHAQP27348 245 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 L1CAMP32004 1257 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 ARL4AP40617 200 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 PSEN1P49768 467 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 OTUD4Q01804 1114 aaKnown RBP7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CREMQ03060 361 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 MMRN1Q13201 1228 aa7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 BYSLQ13895 437 aaKnown RBP7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 HLTFQ14527 1009 aaKnown RBP eCLIP7.94□□□□□ -1.14
SCARNA20.1-201ENST00000516009 CA9Q16790 459 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms