RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 NT5C3BQ969T7 300 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 ACSF2Q96CM8 615 aaPredicted RBP12.45□□□□□ -0.42
LMNA-224ENST00000515711 FAF2Q96CS3 445 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 PGAP3Q96FM1 320 aaPredicted RBP12.45□□□□□ -0.42
LMNA-224ENST00000515711 SNF8Q96H20 258 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 RUFY1Q96T51 708 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 PLEKHA4Q9H4M7 779 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 ASIC3Q9UHC3 531 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 AP4E1Q9UPM8 1137 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 KIAA1671Q9BY89 1806 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 GREB1Q4ZG55 1949 aa12.45□□□□□ -0.42
LMNA-224ENST00000515711 GOLGA6BA6NDN3 693 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 APOL1O14791 398 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 MCF2LO15068 1137 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 AMHP03971 560 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ITIH2P19823 946 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 BDNFP23560 247 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 KCNJ1P48048 391 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 SLC11A1P49279 550 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
LMNA-224ENST00000515711 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 MRPL58Q14197 206 aaKnown RBP12.44□□□□□ -0.42
LMNA-224ENST00000515711 OASLQ15646 514 aaKnown RBP12.44□□□□□ -0.42
LMNA-224ENST00000515711 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 SLC39A12Q504Y0 691 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 DCAF6Q58WW2 860 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 CFAP58Q5T655 872 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 FAM171A1Q5VUB5 890 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ANKS3Q6ZW76 656 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 GSTA5Q7RTV2 222 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ANKS1BQ7Z6G8 1248 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 DEFB128Q7Z7B8 93 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ALLCQ8N6M5 410 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 SLC35B2Q8TB61 432 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ART4Q93070 314 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 NTAN1Q96AB6 310 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 RNF157Q96PX1 679 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 FOXP3Q9BZS1 431 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 PCDH18Q9HCL0 1135 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ZDHHC18Q9NUE0 388 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 TMLHEQ9NVH6 421 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 MARCH5Q9NX47 278 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 GRHL1Q9NZI5 618 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 PCDHB5Q9Y5E4 795 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 USP3Q9Y6I4 520 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 COL4A6Q14031 1691 aa12.44□□□□□ -0.42
LMNA-224ENST00000515711 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
LMNA-224ENST00000515711 F8W810 466 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 GALTP07902 379 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 ARL4AP40617 200 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
LMNA-224ENST00000515711 CACNA2D1P54289 1103 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 OTUD4Q01804 1114 aaKnown RBP12.43□□□□□ -0.42
LMNA-224ENST00000515711 SLMAPQ14BN4 828 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 NOMO1Q15155 1222 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 LLGL1Q15334 1064 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 SHHQ15465 462 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 EFHC2Q5JST6 749 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 C9orf50Q5SZB4 431 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 GPRIN1Q7Z2K8 1008 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 ALYREFQ86V81 257 aaKnown RBP12.43□□□□□ -0.42
LMNA-224ENST00000515711 LRRTM3Q86VH5 581 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 DDX42Q86XP3 938 aaKnown RBP eCLIP12.43□□□□□ -0.42
LMNA-224ENST00000515711 ARHGAP18Q8N392 663 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 ACTL9Q8TC94 416 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 SPPL2BQ8TCT7 592 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 P3H4Q92791 437 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 HAUS1Q96CS2 278 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 C8orf48Q96LL4 319 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 CEP295NLQ96MC4 621 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 TMEM209Q96SK2 561 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 KCNK16Q96T55 309 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 UHRF1Q96T88 793 aaPredicted RBP12.43□□□□□ -0.42
LMNA-224ENST00000515711 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 LBHD1Q9BQE6 289 aaPredicted RBP12.43□□□□□ -0.42
LMNA-224ENST00000515711 FBXO44Q9H4M3 255 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 PCDH9Q9HC56 1237 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 DNPEPQ9ULA0 475 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 NEU2Q9Y3R4 380 aa12.43□□□□□ -0.42
LMNA-224ENST00000515711 CFAP69A5D8W1 941 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 H3BRJ5 948 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 M0QYT0 321 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 SMAPO00193 183 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 KIAA0355O15063 1070 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 OPA1O60313 960 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 DGKIO75912 1065 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 BAIAP3O94812 1187 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 TIMP1P01033 207 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 KRT14P02533 472 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 CD48P09326 243 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 FAM153BP0C7A2 387 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 USP17L7P0C7H9 530 aa12.42□□□□□ -0.42
LMNA-224ENST00000515711 NCAM1P13591 858 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms