RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 KCTD15Q96SI1 283 aaPredicted RBP16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 TMEM209Q96SK2 561 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 PCDHB8Q9UN66 801 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 YJEFN3A6XGL0 299 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 E7ENQ6 273 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 NDC80O14777 642 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 NBNO60934 754 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 ACSL3O95573 720 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 CYP2F1P24903 491 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 BCAR1P56945 870 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 DARS2Q6PI48 645 aaKnown RBP16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 LRRTM3Q86VH5 581 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 ZC3H18Q86VM9 953 aaKnown RBP16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 FAM131BQ86XD5 332 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 THEM5Q8N1Q8 247 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 NRDE2Q9H7Z3 1164 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 NINJ2Q9NZG7 142 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 FZD10Q9ULW2 581 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 STAP1Q9ULZ2 295 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 SHOC2Q9UQ13 582 aa16.07■□□□□ 0.16
THUMPD3-210ENST00000515662 SHOX2O60902 331 aaPredicted RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 USP17L7P0C7H9 530 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 BDNFP23560 247 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 BFSP2Q13515 415 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 GPNMBQ14956 572 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 KYNUQ16719 465 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 CEP128Q6ZU80 1094 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 B4GALNT4Q76KP1 1039 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 C10orf67Q8IYJ2 551 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 COLGALT2Q8IYK4 626 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 RBM15Q96T37 977 aaKnown RBP eCLIP16.06■□□□□ 0.162e-7■■□□□ 13.5
THUMPD3-210ENST00000515662 TBC1D13Q9NVG8 400 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 NOVA2Q9UNW9 492 aaKnown RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 NAALADL1Q9UQQ1 740 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 M0QYT0 321 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 ZBED1O96006 694 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 STIP1P31948 543 aaKnown RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 PCGF5Q86SE9 256 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 CROCCP2Q86T23 111 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 PSTKQ8IV42 348 aaKnown RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 PRCCQ92733 491 aaPredicted RBP16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 PGM2Q96G03 612 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 CSPG4P5Q96PW8 444 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 RABEP2Q9H5N1 569 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 TMEM161AQ9NX61 479 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 KANSL3Q9P2N6 904 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 HEY1Q9Y5J3 304 aa16.06■□□□□ 0.16
THUMPD3-210ENST00000515662 H7C0C1 242 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 MYO1CO00159 1063 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 COL6A1P12109 1028 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 ATP5OP48047 213 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 MAPRE1Q15691 268 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 BHLHA9Q7RTU4 235 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 TLCD1Q96CP7 247 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 CAPS2Q9BXY5 557 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 USP29Q9HBJ7 922 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 CWC15Q9P013 229 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 TLDC2A0PJX2 215 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 DCDC2CA8MYV0 355 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 TMEM189-UBE2V1I3L0A0 370 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 MAGEA4P43358 317 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 TSPY1Q01534 308 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 YWHAHQ04917 246 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 C6orf118Q5T5N4 469 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 PYROXD2Q8N2H3 581 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 DBF4BQ8NFT6 615 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 EPS8L3Q8TE67 593 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 CPT1BQ92523 772 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 DMAP1Q9NPF5 467 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 PAK6Q9NQU5 681 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 PIGVQ9NUD9 493 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 RSPH14Q9UHP6 348 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 RRP15Q9Y3B9 282 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 USP3Q9Y6I4 520 aa16.05■□□□□ 0.16
THUMPD3-210ENST00000515662 SYNJ2BP-COX16A0A087WUM0 186 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 ENPP3O14638 875 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 CAPN9O14815 690 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 LTFP02788 710 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 ZFXP17010 805 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 HPDP32754 393 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 NRLP54845 237 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 NME3Q13232 169 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 SRLQ86TD4 932 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 C9orf72Q96LT7 481 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 ROPN1BQ9BZX4 212 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 ROPN1Q9HAT0 212 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 COX16Q9P0S2 106 aa16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 RCOR3Q9P2K3 495 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-210ENST00000515662 DNAJB4Q9UDY4 337 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms