RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CCDC130P13994 396 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 MAOBP27338 520 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 CD6P30203 668 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 CASP4P49662 377 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 AP3M2P53677 418 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 GRIK2Q13002 908 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 KIAA1324Q6UXG2 1013 aaKnown RBP16.63■□□□□ 0.25
LMNA-223ENST00000515459 SCARA5Q6ZMJ2 495 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 SLC2A14Q8TDB8 520 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 CSNK1G1Q9HCP0 422 aa16.63■□□□□ 0.25
LMNA-223ENST00000515459 APOBEC2Q9Y235 224 aaKnown RBP16.63■□□□□ 0.25
LMNA-223ENST00000515459 PLXNB3Q9ULL4 1909 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 FASNP49327 2511 aaKnown RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 MEI4A8MW99 385 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 WASH3PC4AMC7 463 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 EXOC3O60645 756 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 CISD3P0C7P0 127 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 MAP3K7CLP57077 242 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 NCOA4Q13772 614 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 STARD3Q14849 445 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 STK38Q15208 465 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 DHX58Q96C10 678 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 SDCBP2Q9H190 292 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 NFE2L3Q9Y4A8 694 aa16.62■□□□□ 0.25
LMNA-223ENST00000515459 ANKRD11Q6UB99 2663 aaPredicted RBP16.62■□□□□ 0.25
LMNA-223ENST00000515459 PTPRBP23467 1997 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 A0A1B0GTW7 788 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
LMNA-223ENST00000515459 P4HA1P13674 534 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 EHHADHQ08426 723 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 BMT2Q1RMZ1 405 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 C19orf48Q6RUI8 117 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 UNC13DQ70J99 1090 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 CRYBG2Q8N1P7 616 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 IQUBQ8NA54 791 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 PLEKHO2Q8TD55 490 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 PARD3BQ8TEW8 1205 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 DNASE2BQ8WZ79 361 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 BHMTQ93088 406 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 TOE1Q96GM8 510 aaKnown RBP16.61■□□□□ 0.25
LMNA-223ENST00000515459 CCDC86Q9H6F5 360 aaKnown RBP16.61■□□□□ 0.25
LMNA-223ENST00000515459 PRDM16Q9HAZ2 1276 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 OSER1Q9NX31 292 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 WSB2Q9NYS7 404 aaPredicted RBP16.61■□□□□ 0.25
LMNA-223ENST00000515459 PLK2Q9NYY3 685 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 SCML2Q9UQR0 700 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 STON1Q9Y6Q2 735 aa16.61■□□□□ 0.25
LMNA-223ENST00000515459 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
LMNA-223ENST00000515459 FAM200BP0CF97 657 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 NCAM1P13591 858 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 TRIM21P19474 475 aaKnown RBP16.6■□□□□ 0.25
LMNA-223ENST00000515459 PLA2G4AP47712 749 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 ZNF132P52740 706 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 NDST1P52848 882 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 CLDN10P78369 228 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 ORC1Q13415 861 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 KNOP1Q1ED39 458 aaKnown RBP16.6■□□□□ 0.25
LMNA-223ENST00000515459 SGSM1Q2NKQ1 1148 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 FUT11Q495W5 492 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 KLHDC10Q6PID8 442 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 GLRX5Q86SX6 157 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 UNC93AQ86WB7 457 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 ZCCHC9Q8N567 271 aaKnown RBP16.6■□□□□ 0.25
LMNA-223ENST00000515459 LINC00301Q8NCQ3 95 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 CADM4Q8NFZ8 388 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 GPR174Q9BXC1 333 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 SLC39A2Q9NP94 309 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 ITM2CQ9NQX7 267 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 FAM49BQ9NUQ9 324 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
LMNA-223ENST00000515459 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 FBXO10Q9UK96 956 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 PCOLCE2Q9UKZ9 415 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
LMNA-223ENST00000515459 NPC1O15118 1278 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 SPTLC2O15270 562 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 CYP26A1O43174 497 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 CBFA2T3O75081 653 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 PPP6R2O75170 966 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 VNN1O95497 513 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 RARGP13631 454 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 ADORA2BP29275 332 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 C10orf120Q5SQS8 335 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 Q6ZNB5 142 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 CLEC20AQ6ZU45 233 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 GPRIN1Q7Z2K8 1008 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 PDZD3Q86UT5 571 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 C12orf29Q8N999 325 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 GOLGA5Q8TBA6 731 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms