RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 NEK11Q8NG66 645 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 CCDC26Q8TAB7 109 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 SECISBP2LQ93073 1101 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 RSPRY1Q96DX4 576 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 SPAG5Q96R06 1193 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 SLC22A12Q96S37 553 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 GANQ9H2C0 597 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 TBC1D17Q9HA65 648 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 LTB4R2Q9NPC1 389 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 DUS2Q9NX74 493 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 CHORDC1Q9UHD1 332 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 NAGPAQ9UK23 515 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 LSM7Q9UK45 103 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 STRIP2Q9ULQ0 834 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 CCL26Q9Y258 94 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ZNF510Q9Y2H8 683 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 SIK3Q9Y2K2 1263 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 SH3BP1Q9Y3L3 701 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 FHOD1Q9Y613 1164 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 CPQQ9Y646 472 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 PIAS3Q9Y6X2 628 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ZDBF2Q9HCK1 2354 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 F5P12259 2224 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 FANCMQ8IYD8 2048 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 A0A1B0GTH6 734 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 A0A1W2PQH9 124 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 FAM86C2PA6NEL3 165 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 FOXN3O00409 490 aaPredicted RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 LATS1O95835 1130 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ADH1CP00326 375 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 TPM3P06753 285 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 GLI1P08151 1106 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ATP1A3P13637 1013 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 CYP11B1P15538 503 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 AVPR2P30518 371 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 CTHP32929 405 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 CDH5P33151 784 aaPredicted RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 KRT9P35527 623 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 USP8P40818 1118 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 STAT1P42224 750 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 JAM2P57087 298 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 DAOAP59103 153 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ZNF445P59923 1031 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 YWHAGP61981 247 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 MTA1Q13330 715 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 PDCLQ13371 301 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 NNTQ13423 1086 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 LRRC32Q14392 662 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 SYCP1Q15431 976 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 EML3Q32P44 896 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 FIGNQ5HY92 759 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 PPP1R2P3Q6NXS1 205 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 PMF1Q6P1K2 205 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 TRIM72Q6ZMU5 477 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 HTR3DQ70Z44 454 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 TMEM110Q86TL2 294 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 SYNPOQ8N3V7 929 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 MSANTD4Q8NCY6 345 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 PLD4Q96BZ4 506 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 LRRC3BQ96PB8 259 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 CYP2S1Q96SQ9 504 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ZSWIM1Q9BR11 485 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 SLC4A5Q9BY07 1137 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ULBP1Q9BZM6 244 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 DCLK3Q9C098 648 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 RNF38Q9H0F5 515 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 SMG9Q9H0W8 520 aaKnown RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 CCSER2Q9H7U1 834 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 CBX8Q9HC52 389 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 HEBP1Q9NRV9 189 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 FAM207AQ9NSI2 230 aaPredicted RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 ASNSD1Q9NWL6 643 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 SIT1Q9Y3P8 196 aa8.58□□□□□ -1.04
NEDD4-210ENST00000513957 HBS1LQ9Y450 684 aaKnown RBP8.58□□□□□ -1.04
NEDD4-210ENST00000513957 MYOFQ9NZM1 2061 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 TULP2O00295 520 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SERPINC1P01008 464 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 LTFP02788 710 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SOX5P35711 763 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SCNN1AP37088 669 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 GCGRP47871 477 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 POLR2FP61218 127 aaKnown RBP8.57□□□□□ -1.04
NEDD4-210ENST00000513957 ZXDBP98169 803 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 FBXO43Q4G163 708 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 DGKKQ5KSL6 1271 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 C10orf120Q5SQS8 335 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 BTBD8Q5XKL5 378 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 MSANTD2Q6P1R3 559 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 LRSAM1Q6UWE0 723 aa8.57□□□□□ -1.04
NEDD4-210ENST00000513957 TOGARAM2Q6ZUX3 1019 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms