RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 STIP1P31948 543 aaKnown RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 BMP8BP34820 402 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 GRIK1P39086 918 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 HCAR3P49019 387 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 SLC11A1P49279 550 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 DAOAP59103 153 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 SLC25A11Q02978 314 aaKnown RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 ADCY1Q08828 1119 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 TFDP2Q14188 446 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 SMC1AQ14683 1233 aaKnown RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 CTXN3Q4LDR2 81 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 LLGL2Q6P1M3 1020 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
TPM3-221ENST00000513769 BZW1Q7L1Q6 419 aaKnown RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 MON1AQ86VX9 555 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 RNF168Q8IYW5 571 aaPredicted RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 NUP93Q8N1F7 819 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 DEFB123Q8N688 67 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 ZMIZ2Q8NF64 920 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 CCHCR1Q8TD31 782 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 IGSF21Q96ID5 467 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 SPATA17Q96L03 361 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 KRT12Q99456 494 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 NPY6RQ99463 290 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 GDF15Q99988 308 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 RHOXF2Q9BQY4 288 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 GPR62Q9BZJ7 368 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 TSPYL1Q9H0U9 437 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 FAM114A2Q9NRY5 505 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 ABCC13Q9NSE7 274 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 RCOR3Q9P2K3 495 aaPredicted RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 TJP2Q9UDY2 1190 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 RASAL2Q9UJF2 1139 aa10.31□□□□□ -0.76
TPM3-221ENST00000513769 ZMYND8Q9ULU4 1186 aaPredicted RBP10.31□□□□□ -0.76
TPM3-221ENST00000513769 FAM92AA1XBS5 289 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 I3L4J1 428 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 TNFRSF10BO14763 440 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 CAPN9O14815 690 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 HCRTO43612 131 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 DAB1O75553 588 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 WFS1O76024 890 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 RTN3O95197 1032 aaPredicted RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 CSF2RAP15509 400 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 LAG3P18627 525 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 FLT3P36888 993 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 COILP38432 576 aaPredicted RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 CDKN2BP42772 138 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 DNA2P51530 1060 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 RPL10AP62906 217 aaKnown RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 CREMQ03060 361 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 KRT17Q04695 432 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 C2orf54Q08AI8 447 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 TCTN1Q2MV58 587 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 ARL13BQ3SXY8 428 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 ZFYVE27Q5T4F4 411 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 TPGS2Q68CL5 300 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 SLC8B1Q6J4K2 584 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 CCDC137Q6PK04 289 aaKnown RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 KCNT2Q6UVM3 1135 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 SPOCD1Q6ZMY3 1216 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 DDX53Q86TM3 631 aaKnown RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 CCDC50Q8IVM0 306 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 DEFB106AQ8N104 65 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 EMC1Q8N766 993 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 PRELID2Q8N945 189 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 BBOF1Q8ND07 529 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 OR10T2Q8NGX3 314 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 PIK3R5Q8WYR1 880 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 FOXJ1Q92949 421 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 MYLPFQ96A32 169 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 ZNF558Q96NG5 402 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 ERP44Q9BS26 406 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 AP1M1Q9BXS5 423 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 MARCH5Q9NX47 278 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 SPG21Q9NZD8 308 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 CACNG4Q9UBN1 327 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
TPM3-221ENST00000513769 DMGDHQ9UI17 866 aaKnown RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 INSL6Q9Y581 213 aa10.3□□□□□ -0.76
TPM3-221ENST00000513769 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 RANBP2P49792 3224 aaKnown RBP10.3□□□□□ -0.76
TPM3-221ENST00000513769 hCG_1818297A0A087WSY0 165 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 C3orf70A6NLC5 250 aaPredicted RBP10.29□□□□□ -0.76
TPM3-221ENST00000513769 B4GALT3O60512 393 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 UPP2O95045 317 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 GJB6O95452 261 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 LTFP02788 710 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 SOD2P04179 222 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 RALAP11233 206 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 SYN1P17600 705 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 ITIH2P19823 946 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 PPM1AP35813 382 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 PPP3CCP48454 512 aa10.29□□□□□ -0.76
TPM3-221ENST00000513769 MARCKSL1P49006 195 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms