RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CLCN4P51793 760 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 DUSP4Q13115 394 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 TYSND1Q2T9J0 566 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 BTBD16Q32M84 506 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 CCDC152Q4G0S7 254 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 GLRA4Q5JXX5 417 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZBTB37Q5TC79 503 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 BNIPLQ7Z465 357 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 TMEM200AQ86VY9 491 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 CXorf67Q86X51 503 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 SLC22A9Q8IVM8 553 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZNF507Q8TCN5 953 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 RCC1LQ96I51 464 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 MVB12BQ9H7P6 319 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 COQ10BQ9H8M1 238 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 RBM12Q9NTZ6 932 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 CNIH4Q9P003 139 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 APPL1Q9UKG1 709 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 AP4E1Q9UPM8 1137 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 GPC6Q9Y625 555 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 NOS1P29475 1434 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 CCDC78A2IDD5 438 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 GSAPA4D1B5 854 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 HNRNPCL2B2RXH8 293 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 H0YIN7 160 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 H7C1D1 291 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 PDE2AO00408 941 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZNF862O60290 1169 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 HNRNPCL1O60812 293 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 KCNK5O95279 499 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 CPA1P15085 419 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 FLT3LGP49771 235 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 ACTR2P61160 394 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 PDCLQ13371 301 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 RIPK1Q13546 671 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 SNW1Q13573 536 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 NKG7Q16617 165 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 TCP11X2Q5H9J9 407 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 C12orf60Q5U649 245 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 C1orf186Q6ZWK4 172 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 UNC13DQ70J99 1090 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 WDR49Q8IV35 697 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 LYSMD2Q8IV50 215 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 HDDC3Q8N4P3 179 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 CYP2W1Q8TAV3 490 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 SNX22Q96L94 193 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 WRNIP1Q96S55 665 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 MUC13Q9H3R2 512 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 MRPL44Q9H9J2 332 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 TMOD2Q9NZR1 351 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 IL19Q9UHD0 177 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 BAG5Q9UL15 447 aa6.59□□□□□ -1.35
TRAPPC11-209ENST00000512476 TRPM1Q7Z4N2 1603 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 H0YHG0 523 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 DNPH1O43598 174 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 CLEC3AO75596 197 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 MT-ND5P03915 603 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RB1P06400 928 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 CYC1P08574 325 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RHOXF2BP0C7M4 288 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 KLRK1P26718 216 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 NPY4RP50391 375 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RAC3P60763 192 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 HERVK_113P62684 666 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ERVK-24P63145 666 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SARNPP82979 210 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 AAK1Q2M2I8 961 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 HSP90AA5PQ58FG0 334 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 TTC5Q8N0Z6 440 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 MRPL43Q8N983 215 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 DTWD2Q8NBA8 298 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 POGLUT1Q8NBL1 392 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 OR52M1Q8NGK5 317 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 CHURC1Q8WUH1 139 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 MRPL38Q96DV4 380 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZC3H10Q96K80 434 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 VRK1Q99986 396 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RHOXF2Q9BQY4 288 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 PHF7Q9BWX1 381 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 MRPL15Q9P015 296 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 VAV3Q9UKW4 847 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTRH2Q9Y3E5 179 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SYCE3A1L190 88 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SPDYE3A6NKU9 549 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 OR6C76A6NM76 312 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 C1QTNF9BB2RNN3 333 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RGS13O14921 159 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RRP8O43159 456 aaKnown RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 GPRIN2O60269 458 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 PDGFBP01127 241 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 TROVE2P10155 538 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 RARAP10276 462 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 IL1R1P14778 569 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 CHRM3P20309 590 aa6.58□□□□□ -1.36
TRAPPC11-209ENST00000512476 SCNN1GP51170 649 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms