RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MSTO1Q9BUK6 570 aa9.71□□□□□ -0.86
NUP54-211ENST00000512151 NUP58Q9BVL2 599 aa9.71□□□□□ -0.86
NUP54-211ENST00000512151 OSGEPQ9NPF4 335 aa9.71□□□□□ -0.86
NUP54-211ENST00000512151 CRTAC1Q9NQ79 661 aa9.71□□□□□ -0.86
NUP54-211ENST00000512151 TMEM30AQ9NV96 361 aa9.71□□□□□ -0.86
NUP54-211ENST00000512151 ORC3Q9UBD5 711 aaPredicted RBP9.71□□□□□ -0.86
NUP54-211ENST00000512151 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.71□□□□□ -0.86
NUP54-211ENST00000512151 CKAP5Q14008 2032 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 NBASA2RRP1 2371 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 NPHP3-ACAD11A0A0J9YXS1 232 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 PP2D1A8MPX8 630 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 TISP43B9A030 160 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 NEDD8-MDP1E9PL57 170 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 K7ELQ4 463 aaPredicted RBP9.7□□□□□ -0.86
NUP54-211ENST00000512151 GREM1O60565 184 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 MPOP05164 745 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 CDK4P11802 303 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 CR2P20023 1033 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 ACSL1P33121 698 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 LIG4P49917 911 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 CACNA2D1P54289 1103 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
NUP54-211ENST00000512151 CUL4AQ13619 759 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 LINC00303Q3SY05 128 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 KDM7AQ6ZMT4 941 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 NUDT18Q6ZVK8 323 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 DDX42Q86XP3 938 aaKnown RBP eCLIP9.7□□□□□ -0.86
NUP54-211ENST00000512151 DIS3L2Q8IYB7 885 aaKnown RBP9.7□□□□□ -0.86
NUP54-211ENST00000512151 ADGRF2Q8IZF7 708 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 CACTIN-AS1Q8N1I8 211 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 SAP25Q8TEE9 199 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 KCNE4Q8WWG9 221 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 ZNF578Q96N58 590 aaPredicted RBP9.7□□□□□ -0.86
NUP54-211ENST00000512151 CLCA2Q9UQC9 943 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 C2CD2Q9Y426 696 aa9.7□□□□□ -0.86
NUP54-211ENST00000512151 PLXNA2O75051 1894 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 K7ENP7 123 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 GABRDO14764 452 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 HNRNPDLO14979 420 aaKnown RBP9.69□□□□□ -0.86
NUP54-211ENST00000512151 SUV39H1O43463 412 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 JAK2O60674 1132 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 CDKL5O76039 1030 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 PIGRP01833 764 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 WNT1P04628 370 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 IRF1P10914 325 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 TYRP14679 529 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 GUCY2CP25092 1073 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 LMO2P25791 158 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 POLR2BP30876 1174 aaKnown RBP9.69□□□□□ -0.86
NUP54-211ENST00000512151 NCKAP1LP55160 1127 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 MYL7Q01449 175 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 ENPP2Q13822 863 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 C4orf17Q53FE4 359 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 INO80CQ6PI98 192 aaPredicted RBP9.69□□□□□ -0.86
NUP54-211ENST00000512151 ATG14Q6ZNE5 492 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 C4orf32Q8N8J7 132 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 NSUN7Q8NE18 718 aaKnown RBP9.69□□□□□ -0.86
NUP54-211ENST00000512151 CXorf38Q8TB03 319 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 SNX29Q8TEQ0 813 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 PRCCQ92733 491 aaPredicted RBP9.69□□□□□ -0.86
NUP54-211ENST00000512151 BIRC7Q96CA5 298 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 PCED1AQ9H1Q7 454 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 ASB7Q9H672 318 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 BRMS1Q9HCU9 246 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 STARD5Q9NSY2 213 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 MAGEC2Q9UBF1 373 aaPredicted RBP9.69□□□□□ -0.86
NUP54-211ENST00000512151 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 SH3BP1Q9Y3L3 701 aa9.69□□□□□ -0.86
NUP54-211ENST00000512151 BSNQ9UPA5 3926 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 CLEC18AA5D8T8 446 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 F8VP50 259 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 LAD1O00515 517 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 TSPAN3O60637 253 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 MT-CO3P00414 261 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 AFPP02771 609 aaKnown RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 ITGAVP06756 1048 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 ITGB6P18564 788 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 PRKCHP24723 683 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 PPP3CCP48454 512 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 PGFP49763 221 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 SMTNP53814 917 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 NOP14P78316 857 aaKnown RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 ORC1Q13415 861 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 STARD3Q14849 445 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 SOWAHAQ2M3V2 549 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 VSTM1Q6UX27 236 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 CLEC18BQ6UXF7 455 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 CRELD2Q6UXH1 353 aaPredicted RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 TPGS1Q6ZTW0 290 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 CLEC18CQ8NCF0 446 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 VCPIP1Q96JH7 1222 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 ZNF560Q96MR9 790 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 ELF4Q99607 663 aaPredicted RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 DUSP9Q99956 384 aaKnown RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 SYT15Q9BQS2 421 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 BBS2Q9BXC9 721 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 IKZF4Q9H2S9 585 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms