RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SYDE1Q6ZW31 735 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 IRF2BP2Q7Z5L9 587 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 BBS7Q8IWZ6 715 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 KBTBD2Q8IY47 623 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 DNERQ8NFT8 737 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 LNX1Q8TBB1 728 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 ENKURQ8TC29 256 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 MLPHQ9BV36 600 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 PSD3Q9NYI0 1048 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CYP39A1Q9NYL5 469 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CHKBQ9Y259 395 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 V9GYQ6 96 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 B2RBV5 119 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TLR2O60603 784 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CSPG5O95196 566 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CSE1LP55060 971 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 VGLL4Q14135 290 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 MPZL3Q6UWV2 235 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CHMP1BQ7LBR1 199 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TRPM8Q7Z2W7 1104 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 SPATA18Q8TC71 538 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 RAB6BQ9NRW1 208 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 WBP11Q9Y2W2 641 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 USP15Q9Y4E8 981 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 DUOX1Q9NRD9 1551 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 A0A087WZ62 844 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 ZC3H11AO75152 810 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 GJB6O95452 261 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 PRKCIP41743 596 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 KLHL38Q2WGJ6 581 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 LPCAT2Q7L5N7 544 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 KRT35Q92764 455 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 FDXACB1Q9BRP7 624 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 SIK2Q9H0K1 926 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 PABPC3Q9H361 631 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 STAP1Q9ULZ2 295 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 RIPK3Q9Y572 518 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 APOL1O14791 398 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TSPAN4O14817 238 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 SMNDC1O75940 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 RBP3P10745 1247 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 ALOX12P18054 663 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 STAT4Q14765 748 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TMEM132BQ14DG7 1078 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 C16orf62Q7Z3J2 963 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 EMC1Q8N766 993 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 EPS8L3Q8TE67 593 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 AFG1LQ8WV93 481 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 NPHS2Q9NP85 383 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 FAM32AQ9Y421 112 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 SAC3D1A6NKF1 404 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 USP1O94782 785 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF286BP0CG31 522 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 MAGEA4P43358 317 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 LRRC74AQ0VAA2 488 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 RALGDSQ12967 914 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 ADRM1Q16186 407 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TRIQKQ629K1 86 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF560Q96MR9 790 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TSPAN18Q96SJ8 248 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 AIM2O14862 343 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 CDH16O75309 829 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FKBP9O95302 570 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 BCL10O95999 233 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 KYAT1Q16773 422 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 C6orf10Q5SRN2 563 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 LRRC31Q6UY01 552 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FKBP9P1Q75LS8 142 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 PIGUQ9H490 435 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TRABDQ9H4I3 376 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF862O60290 1169 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TPST1O60507 370 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 STAG3L1P0CL83 205 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FNTAP49354 379 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 POU5F1Q01860 360 aaKnown RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 GOLGA7BQ2TAP0 167 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 MCOLN2Q8IZK6 566 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 APPL2Q8NEU8 664 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FAM81AQ8TBF8 368 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TRPM4Q8TD43 1214 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 C18orf25Q96B23 403 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 MNTQ99583 582 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FAM25AB3EWG3 89 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FAM25CB3EWG5 89 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FAM25GB3EWG6 89 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 STMND1H3BQB6 276 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms