RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CLIC5Q9NZA1 410 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 KIAA1257Q9ULG3 409 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 SMG5Q9UPR3 1016 aaKnown RBP13.94□□□□□ -0.18
RNF4-215ENST00000511843 SLC8A2Q9UPR5 921 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 OTOGLQ3ZCN5 2332 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 SLC12A8A0AV02 714 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 BECN2A8MW95 431 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 HRO43593 1189 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 TULP3O75386 442 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 LETM1O95202 739 aaPredicted RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 KAT7O95251 611 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 PAPSS2O95340 614 aaPredicted RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 PNMA6AP0CW24 399 aaPredicted RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 PON1P27169 355 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 CORO1AP31146 461 aaKnown RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 GAD2Q05329 585 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 GOLGA8FQ08AF8 430 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 GOLGA8DPQ0D2H9 430 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 MAN2A1Q16706 1144 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 FBXO43Q4G163 708 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 MIIPQ5JXC2 388 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 BTBD8Q5XKL5 378 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 KLHDC10Q6PID8 442 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 Q6ZNB5 142 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 PRR23BQ6ZRT6 265 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 ETFBKMTQ8IXQ9 262 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 EXOC4Q96A65 974 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 PNKPQ96T60 521 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 BBS2Q9BXC9 721 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 MIS12Q9H081 205 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 SIX2Q9NPC8 291 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 PLK2Q9NYY3 685 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 SFMBT1Q9UHJ3 866 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 LSM7Q9UK45 103 aaKnown RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 CNTN6Q9UQ52 1028 aa13.93□□□□□ -0.18
RNF4-215ENST00000511843 PTPRZ1P23471 2315 aaPredicted RBP13.93□□□□□ -0.18
RNF4-215ENST00000511843 GPR179Q6PRD1 2367 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 HOXC11O43248 304 aaPredicted RBP13.92□□□□□ -0.18
RNF4-215ENST00000511843 MSI1O43347 362 aaKnown RBP13.92□□□□□ -0.18
RNF4-215ENST00000511843 THAP12O43422 761 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 ATG13O75143 517 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 APODP05090 189 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
RNF4-215ENST00000511843 PRKCSHP14314 528 aaPredicted RBP13.92□□□□□ -0.18
RNF4-215ENST00000511843 TYRP14679 529 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 TIE1P35590 1138 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 MFAP3P55082 362 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 DAOAP59103 153 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 KCNJ12Q14500 433 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 DMC1Q14565 340 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 EXOC3L4Q17RC7 722 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 BSPRYQ5W0U4 402 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 LONP2Q86WA8 852 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 ARHGAP18Q8N392 663 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 KCTD13Q8WZ19 329 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 TUBGCP2Q9BSJ2 902 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 DNAJC17Q9NVM6 304 aaKnown RBP13.92□□□□□ -0.18
RNF4-215ENST00000511843 NCDNQ9UBB6 729 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 APEX2Q9UBZ4 518 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 DACH1Q9UI36 760 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 ZNF292O60281 2723 aa13.92□□□□□ -0.18
RNF4-215ENST00000511843 SDK1Q7Z5N4 2213 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 THADAQ6YHU6 1953 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 EP300Q09472 2414 aaPredicted RBP13.91□□□□□ -0.18
RNF4-215ENST00000511843 FAM170AA1A519 330 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 PES1O00541 588 aaKnown RBP13.91□□□□□ -0.18
RNF4-215ENST00000511843 HNRNPLP14866 589 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNF4-215ENST00000511843 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 C11orf57Q6ZUT1 292 aaPredicted RBP13.91□□□□□ -0.18
RNF4-215ENST00000511843 TOGARAM2Q6ZUX3 1019 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 SYT13Q7L8C5 426 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 TADA2BQ86TJ2 420 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 FMNL3Q8IVF7 1028 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 ZNF276Q8N554 614 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 ALLCQ8N6M5 410 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 RUBCNQ92622 972 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 ERLEC1Q96DZ1 483 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 CDK5RAP1Q96SZ6 601 aaKnown RBP13.91□□□□□ -0.18
RNF4-215ENST00000511843 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 CNGB3Q9NQW8 809 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 ST7Q9NRC1 585 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 TAB2Q9NYJ8 693 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 TJP2Q9UDY2 1190 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 CYTH4Q9UIA0 394 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 AGO1Q9UL18 857 aaKnown RBP13.91□□□□□ -0.18
RNF4-215ENST00000511843 STRIP2Q9ULQ0 834 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 NFE2L3Q9Y4A8 694 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 CEP192Q8TEP8 1941 aa13.91□□□□□ -0.18
RNF4-215ENST00000511843 TBC1D3BA6NDS4 549 aa13.9□□□□□ -0.18
RNF4-215ENST00000511843 SGK1O00141 431 aa13.9□□□□□ -0.18
RNF4-215ENST00000511843 KLF8O95600 359 aaPredicted RBP13.9□□□□□ -0.18
RNF4-215ENST00000511843 GNA15P30679 374 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms