RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 LDOC1O95751 146 aaPredicted RBP12.72□□□□□ -0.37
COPS4-210ENST00000511708 LMO2P25791 158 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 TRAPPC10P48553 1259 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 ZNF131P52739 623 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 COPAP53621 1224 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 GTF2BQ00403 316 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 IL9RQ01113 521 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
COPS4-210ENST00000511708 IL17AQ16552 155 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 SNX30Q5VWJ9 437 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 TDRD10Q5VZ19 366 aaKnown RBP12.72□□□□□ -0.37
COPS4-210ENST00000511708 LAYNQ6UX15 382 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 RFFLQ8WZ73 363 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 CNDP2Q96KP4 475 aaKnown RBP12.72□□□□□ -0.37
COPS4-210ENST00000511708 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
COPS4-210ENST00000511708 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
COPS4-210ENST00000511708 FBXO10Q9UK96 956 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 ODF2LQ9ULJ1 636 aa12.72□□□□□ -0.37
COPS4-210ENST00000511708 NEDD8-MDP1E9PL57 170 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 NPC1O15118 1278 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 C7P10643 843 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 PLCG1P19174 1290 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 ACO1P21399 889 aaKnown RBP12.71□□□□□ -0.37
COPS4-210ENST00000511708 ADSSP30520 456 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 DGKGP49619 791 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 CACNA2D1P54289 1103 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 BROXQ5VW32 411 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 SLFN12LQ6IEE8 588 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 HTR3DQ70Z44 454 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 GATAD2AQ86YP4 633 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 OVCA2Q8WZ82 227 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 SNX19Q92543 992 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
COPS4-210ENST00000511708 REEP2Q9BRK0 252 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 ORAI3Q9BRQ5 295 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 BBS2Q9BXC9 721 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
COPS4-210ENST00000511708 WDR35Q9P2L0 1181 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
COPS4-210ENST00000511708 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
COPS4-210ENST00000511708 TERTO14746 1132 aaKnown RBP12.7□□□□□ -0.38
COPS4-210ENST00000511708 PLA2G4BP0C869 781 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 ACSL1P33121 698 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 TUBP50607 506 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 PCBP4P57723 403 aaKnown RBP12.7□□□□□ -0.38
COPS4-210ENST00000511708 TFAMQ00059 246 aaKnown RBP12.7□□□□□ -0.38
COPS4-210ENST00000511708 GUCY1B3Q02153 619 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 ME3Q16798 604 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 HECTD3Q5T447 861 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 DCBLD1Q8N8Z6 715 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 FAM84AQ96KN4 292 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 CCSER2Q9H7U1 834 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 ITGA11Q9UKX5 1188 aa12.7□□□□□ -0.38
COPS4-210ENST00000511708 LAD1O00515 517 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 TSPAN3O60637 253 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 ZDHHC11BP0C7U3 371 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 IRF1P10914 325 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 ACADMP11310 421 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 KRT10P13645 584 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 GLDCP23378 1020 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 CD27P26842 260 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 YWHAQP27348 245 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 PRPHP41219 470 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 ILKQ13418 452 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 SHBQ15464 509 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 PRICKLE2Q7Z3G6 844 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 FAM124AQ86V42 546 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 BRSK2Q8IWQ3 736 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 SAP25Q8TEE9 199 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 FBXO32Q969P5 355 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 BIRC7Q96CA5 298 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 P2RY11Q96G91 374 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 NAF1Q96HR8 494 aaKnown RBP12.69□□□□□ -0.38
COPS4-210ENST00000511708 ZNF578Q96N58 590 aaPredicted RBP12.69□□□□□ -0.38
COPS4-210ENST00000511708 TRIM4Q9C037 500 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 CLCA2Q9UQC9 943 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 SLC27A6Q9Y2P4 619 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
COPS4-210ENST00000511708 ANKRD17O75179 2603 aaKnown RBP12.69□□□□□ -0.38
COPS4-210ENST00000511708 VILLO15195 856 aa12.68□□□□□ -0.38
COPS4-210ENST00000511708 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
COPS4-210ENST00000511708 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
COPS4-210ENST00000511708 ABCD1P33897 745 aa12.68□□□□□ -0.38
COPS4-210ENST00000511708 TOB1P50616 345 aaPredicted RBP12.68□□□□□ -0.38
COPS4-210ENST00000511708 RBP5P82980 135 aa12.68□□□□□ -0.38
COPS4-210ENST00000511708 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms