RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 LRRC4Q9HBW1 653 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 ST7Q9NRC1 585 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 SPATA6Q9NWH7 488 aaPredicted RBP16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 THG1LQ9NWX6 298 aaKnown RBP16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 COMMD8Q9NX08 183 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 MYOFQ9NZM1 2061 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 EHD2Q9NZN4 543 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 TJP2Q9UDY2 1190 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 ARHGAP26Q9UNA1 814 aa16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 MRPS17Q9Y2R5 130 aaKnown RBP16.32■□□□□ 0.2
SH3TC1-220ENST00000511002 GOLGA6L3A6NEY3 463 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 LEFTY2O00292 366 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 SP9P0CG40 484 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 LCP1P13796 627 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 HOXC13P31276 330 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CDH5P33151 784 aaPredicted RBP16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 NBL1P41271 181 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 ADKP55263 362 aaKnown RBP16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 NOMO3P69849 1222 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 KLHL30Q0D2K2 578 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 MTAPQ13126 283 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 RUNX3Q13761 415 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 NAA35Q5VZE5 725 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 TSSK4Q6SA08 328 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 Q6ZS52 159 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 NDRG1Q92597 394 aaKnown RBP16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 SYN2Q92777 582 aaPredicted RBP16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 WBP2Q969T9 261 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CPXM1Q96SM3 734 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 SLC4A5Q9BY07 1137 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CHRDQ9H2X0 955 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 FBXO44Q9H4M3 255 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 HAUS4Q9H6D7 363 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CCSER2Q9H7U1 834 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 SCML2Q9UQR0 700 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CEP83Q9Y592 693 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 CPQQ9Y646 472 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 USP3Q9Y6I4 520 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 R4GN57 208 aa16.31■□□□□ 0.2
SH3TC1-220ENST00000511002 E5RJQ4 531 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 COCHO43405 550 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 CYP1A1P04798 512 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 TPM1P09493 284 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 ZDHHC11BP0C7U3 371 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 CDC25BP30305 580 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 RPS9P46781 194 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 MLLT6P55198 1093 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 SLC7A9P82251 487 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 EML3Q32P44 896 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 PTPN20Q4JDL3 420 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 CCDC186Q7Z3E2 898 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 ZNF571Q7Z3V5 609 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 RALGPS2Q86X27 583 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 SIX6OS1Q8N1H7 587 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 CLEC4CQ8WTT0 213 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 STK32AQ8WU08 396 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 OSCP1Q8WVF1 389 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 ZFRQ96KR1 1074 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 HSFY1Q96LI6 401 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 MIS12Q9H081 205 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 FBRSL1Q9HCM7 1045 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 C2orf42Q9NWW7 574 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 OSER1Q9NX31 292 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 PIEZO1Q92508 2521 aa16.3■□□□□ 0.2
SH3TC1-220ENST00000511002 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 NCAM2O15394 837 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 LAMTOR5O43504 91 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 ZBED1O96006 694 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 ERBB2P04626 1255 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 TCF3P15923 654 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 HNRNPH3P31942 346 aaKnown RBP16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 PPP3CCP48454 512 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 ARID5BQ14865 1188 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 CLEC16AQ2KHT3 1053 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 PM20D1Q6GTS8 502 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 CC2D1AQ6P1N0 951 aaPredicted RBP16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 WDR59Q6PJI9 974 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 TRIM72Q6ZMU5 477 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 SCD5Q86SK9 330 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 PDZD8Q8NEN9 1154 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 CPA5Q8WXQ8 436 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 OVCA2Q8WZ82 227 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
SH3TC1-220ENST00000511002 ECT2Q9H8V3 914 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms