RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 F13A1P00488 732 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 NR3C1P04150 777 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 MAOBP27338 520 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 SPDYCQ5MJ68 293 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 GRAMD4Q6IC98 578 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 BHMTQ93088 406 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 SPACA7Q96KW9 195 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 HNRNPABQ99729 332 aaKnown RBP16.8■□□□□ 0.28
RAB40C-202ENST00000509637 GABRG3Q99928 467 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 BBS2Q9BXC9 721 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 NUSAP1Q9BXS6 441 aaKnown RBP16.8■□□□□ 0.28
RAB40C-202ENST00000509637 MAGEF1Q9HAY2 307 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB40C-202ENST00000509637 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 SLC6A14Q9UN76 642 aa16.8■□□□□ 0.28
RAB40C-202ENST00000509637 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-202ENST00000509637 STC2O76061 302 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 CFIP05156 583 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 SERPINF2P08697 491 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 SLFN14P0C7P3 912 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 ZSCAN22P10073 491 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-202ENST00000509637 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
RAB40C-202ENST00000509637 LMAN2Q12907 356 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 DUOXA1Q1HG43 343 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 BTBD8Q5XKL5 378 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 TRIML1Q8N9V2 468 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 RBBP8NLQ8NC74 664 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-202ENST00000509637 TAS1R2Q8TE23 839 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 MRGPRX1Q96LB2 322 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 GTPBP2Q9BX10 602 aaKnown RBP16.79■□□□□ 0.28
RAB40C-202ENST00000509637 ASPMQ8IZT6 3477 aa16.79■□□□□ 0.28
RAB40C-202ENST00000509637 ATP8B3O60423 1300 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 UPK3BL1B0FP48 263 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 KCNJ18B7U540 433 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 UPK3BL2E5RIL1 263 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 RARGP13631 454 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
RAB40C-202ENST00000509637 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
RAB40C-202ENST00000509637 KIF11P52732 1056 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 AP3M2P53677 418 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 SIM1P81133 766 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-202ENST00000509637 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 GEN1Q17RS7 908 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 CHCHD4Q8N4Q1 142 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 SEMA4DQ92854 862 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 CYFIP2Q96F07 1278 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 ZNF419Q96HQ0 510 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-202ENST00000509637 TLR8Q9NR97 1041 aaKnown RBP16.78■□□□□ 0.28
RAB40C-202ENST00000509637 USP3Q9Y6I4 520 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 SLCO1B1Q9Y6L6 691 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 ZFYVE26Q68DK2 2539 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 PLXNB3Q9ULL4 1909 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 NUMA1Q14980 2115 aa16.78■□□□□ 0.28
RAB40C-202ENST00000509637 FAM208BQ5VWN6 2430 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 PDXKO00764 312 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.28
RAB40C-202ENST00000509637 ME1P48163 572 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 GCLMP48507 274 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 BNC1Q01954 994 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 PPP1R26Q5T8A7 1209 aaPredicted RBP16.77■□□□□ 0.28
RAB40C-202ENST00000509637 FYB2Q5VWT5 728 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 CHPFQ8IZ52 775 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 NDRG1Q92597 394 aaKnown RBP16.77■□□□□ 0.28
RAB40C-202ENST00000509637 HSPA12BQ96MM6 686 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 MKRN2Q9H000 416 aaKnown RBP16.77■□□□□ 0.28
RAB40C-202ENST00000509637 FBXO44Q9H4M3 255 aa16.77■□□□□ 0.28
RAB40C-202ENST00000509637 KNL1Q8NG31 2342 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 ARHGAP33O14559 1287 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 AP5Z1O43299 807 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 SH3BP5O60239 455 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 CILPO75339 1184 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 PENKP01210 267 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-202ENST00000509637 FAM200BP0CF97 657 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
RAB40C-202ENST00000509637 IL12RB1P42701 662 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 ENPP2Q13822 863 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 FUT11Q495W5 492 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 TMEM215Q68D42 235 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 SNX21Q969T3 373 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 NACA2Q9H009 215 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 TRAF3IP3Q9Y228 551 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 NEUROG3Q9Y4Z2 214 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 STON1Q9Y6Q2 735 aa16.76■□□□□ 0.27
RAB40C-202ENST00000509637 DMXL2Q8TDJ6 3036 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 IKBKBO14920 756 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 PFKFB1P16118 471 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 HOXD12P35452 270 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 PIK3CAP42336 1068 aa16.75■□□□□ 0.27
RAB40C-202ENST00000509637 PLA2G4AP47712 749 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms