RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ORC1Q13415 861 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 HIF1AQ16665 826 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 SKIDA1Q1XH10 827 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ZC2HC1CQ53FD0 456 aaPredicted RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 PRAMEF14Q5SWL7 426 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 SDHAF4Q5VUM1 108 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 CDCA2Q69YH5 1023 aaPredicted RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 GRAMD4Q6IC98 578 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 RHBDF2Q6PJF5 856 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 B3GNT9Q6UX72 402 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ALKAL1Q6UXT8 129 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 PTRH1Q86Y79 214 aaKnown RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 CACTIN-AS1Q8N1I8 211 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 CEP120Q8N960 986 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ZSCAN1Q8NBB4 408 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 SPATA20Q8TB22 786 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 RIN3Q8TB24 985 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ETNPPLQ8TBG4 499 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 PIGOQ8TEQ8 1089 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 LRRC15Q8TF66 581 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 SNRNP27Q8WVK2 155 aaKnown RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 EDEM1Q92611 657 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 PRCCQ92733 491 aaPredicted RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 EXTL1Q92935 676 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ALKBH8Q96BT7 664 aaKnown RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 SIPA1Q96FS4 1042 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 MRGPRX1Q96LB2 322 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 SENP8Q96LD8 212 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ZMAT2Q96NC0 199 aaKnown RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 DEPDC7Q96QD5 511 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 XPO6Q96QU8 1125 aaKnown RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 SLC22A12Q96S37 553 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 CCNL2Q96S94 520 aaPredicted RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 NAP1L4Q99733 375 aaKnown RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 ACE2Q9BYF1 805 aaPredicted RBP4.13□□□□□ -1.75
RNF4-211ENST00000509206 SLC25A18Q9H1K4 315 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 SLC6A17Q9H1V8 727 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 POLR1BQ9H9Y6 1135 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ITM2CQ9NQX7 267 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ZDHHC3Q9NYG2 299 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 TRPM5Q9NZQ8 1165 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 TBC1D14Q9P2M4 693 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ARHGAP26Q9UNA1 814 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 TNFSF13BQ9Y275 285 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 TAF6LQ9Y6J9 622 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 TSC2P49815 1807 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 CACNA1DQ01668 2161 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 ATMQ13315 3056 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 LRRK2Q5S007 2527 aa4.13□□□□□ -1.75
RNF4-211ENST00000509206 KNL1Q8NG31 2342 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 A0A087WWV3 80 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 KLF18A0A0U1RQI7 1052 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 A0A1B0GTQ1 180 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 C2orf78A6NCI8 922 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SCAMP3O14828 347 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 ADAMTS3O15072 1205 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 YKT6O15498 198 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 PRPF3O43395 683 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 CCNT1O60563 726 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 TULP3O75386 442 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ITGB2P05107 769 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 MCF2P10911 925 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 MBL2P11226 248 aaPredicted RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 XRCC6P12956 609 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNF4-211ENST00000509206 TCF3P15923 654 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 PCSK2P16519 638 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 HMGA1P17096 107 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 PAX3P23760 479 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 TNFRSF8P28908 595 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 NAMPTP43490 491 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 GPR15P49685 360 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ACADVLP49748 655 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 RARRES1P49788 294 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 TPMTP51580 245 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 BCAT1P54687 386 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 INSM1Q01101 510 aaPredicted RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 MYL7Q01449 175 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SPAG1Q07617 926 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 NFE2Q16621 373 aaPredicted RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 DDR2Q16832 855 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ARL13BQ3SXY8 428 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 LINC00303Q3SY05 128 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SLC45A4Q5BKX6 768 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 XKR4Q5GH76 650 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 LY6G5CQ5SRR4 150 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 FHL5Q5TD97 284 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 NT5DC1Q5TFE4 455 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 EGFLAMQ63HQ2 1017 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 APOA5Q6Q788 366 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 MOXD1Q6UVY6 613 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 DHX32Q7L7V1 743 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 TMEM150AQ86TG1 271 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 C12orf40Q86WS4 652 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 DDX42Q86XP3 938 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNF4-211ENST00000509206 TMPRSS6Q8IU80 811 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SCN4BQ8IWT1 228 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SLFN12Q8IYM2 578 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ARL14Q8N4G2 192 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 DCBLD1Q8N8Z6 715 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms