RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 HIPK2Q9H2X6 1198 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FOXP1Q9H334 677 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 DDX21Q9NR30 783 aaKnown RBP eCLIP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 LUZP4Q9P127 313 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CCNL1Q9UK58 526 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 PHTF1Q9UMS5 762 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM50BQ9Y247 325 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 LRCH1Q9Y2L9 728 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 MORC2Q9Y6X9 1032 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CKAP5Q14008 2032 aa2.8□□□□□ -1.96
DEPDC1B-204ENST00000509006 CFAP69A5D8W1 941 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 TMEM232C9JQI7 657 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 PMM2O15305 246 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 EPB41L2O43491 1005 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 SMAD6O43541 496 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 KRT86O43790 486 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 TLR2O60603 784 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 TOMM40O96008 361 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 LDHCP07864 332 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZKSCAN1P17029 563 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 MT3P25713 68 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 GKP32189 559 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 KCNJ5P48544 419 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 CACNB3P54284 484 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 GEMIN4P57678 1058 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM193AP78312 1265 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 GHRHRQ02643 423 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 CFHR1Q03591 330 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 FHL3Q13643 280 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 KRT81Q14533 505 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 SEC23BQ15437 767 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 SLC4A8Q2Y0W8 1093 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 ATAT1Q5SQI0 421 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 HYIQ5T013 277 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 JAKMIP3Q5VZ66 844 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 DARS2Q6PI48 645 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 ANKRD18AQ8IVF6 992 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 MAP4K1Q92918 833 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 HPS3Q969F9 1004 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 TIFAQ96CG3 184 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 CTHRC1Q96CG8 243 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 LRGUKQ96M69 825 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 SIGLEC11Q96RL6 698 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 CGRRF1Q99675 332 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 DPCDQ9BVM2 203 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 DPH1Q9BZG8 443 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 SARS2Q9NP81 518 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 TRMT13Q9NUP7 481 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 GAR1Q9NY12 217 aaKnown RBP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 AMFRQ9UKV5 643 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 TMX2Q9Y320 296 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 DGKBQ9Y6T7 804 aa2.79□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZMYM2Q9UBW7 1377 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ITIH6Q6UXX5 1313 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 A0A088AWK7 358 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ABHD14A-ACY1A0A1B0GW23 586 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM227AF5H4B4 570 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 FOXN3O00409 490 aaPredicted RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 APAF1O14727 1248 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 PRPF3O43395 683 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 PMPCBO75439 489 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ZBED1O96006 694 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 MT-CO3P00414 261 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 HRGP04196 525 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 HSP90AB1P08238 724 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 APEHP13798 732 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ATF7P17544 494 aaPredicted RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 RHCEP18577 417 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 GRK6P43250 576 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 RAB1AP62820 205 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 RHDQ02161 417 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 KRT17Q04695 432 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 LMAN2Q12907 356 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 GRM3Q14832 879 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ELF2Q15723 593 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 LONRF1Q17RB8 773 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 MGAT5BQ3V5L5 792 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 AWAT1Q58HT5 328 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 FAM133BQ5BKY9 247 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 UBAP2Q5T6F2 1119 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ATG9BQ674R7 924 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 EPM2AIP1Q7L775 607 aaPredicted RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 CHST15Q7LFX5 561 aaPredicted RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 DPP9Q86TI2 863 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 LIX1LQ8IVB5 337 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 SIRT6Q8N6T7 355 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 C1orf131Q8NDD1 294 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 OSR1Q8TAX0 266 aaPredicted RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 TMEM171Q8WVE6 324 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 MTFMTQ96DP5 389 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 CCDC138Q96M89 665 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 CAMK1GQ96NX5 476 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 MAP3K14Q99558 947 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 P2RX7Q99572 595 aaKnown RBP2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 C17orf80Q9BSJ5 609 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 TRMOQ9BU70 441 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 ISCA1Q9BUE6 129 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 TRIM54Q9BYV2 358 aa2.78□□□□□ -1.96
DEPDC1B-204ENST00000509006 UNC45AQ9H3U1 944 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms