RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 STX10O60499 249 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 STC2O76061 302 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 KLKB1P03952 638 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 TRIM21P19474 475 aaKnown RBP17.06■□□□□ 0.32
LMNA-222ENST00000508500 BCKDHBP21953 392 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 CUL2Q13617 745 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 CLEC17AQ6ZS10 378 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 BHLHA9Q7RTU4 235 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 MIB1Q86YT6 1006 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 ELOA2Q8IYF1 753 aaPredicted RBP17.06■□□□□ 0.32
LMNA-222ENST00000508500 FRMD1Q8N878 549 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 OLIG1Q8TAK6 271 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
LMNA-222ENST00000508500 UBXN6Q9BZV1 441 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 MARK1Q9P0L2 795 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 NAGPAQ9UK23 515 aa17.06■□□□□ 0.32
LMNA-222ENST00000508500 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.05■□□□□ 0.32
LMNA-222ENST00000508500 PLA2G4AP47712 749 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 LIMK1P53667 647 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 LRMPQ12912 555 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 PPM1JQ5JR12 505 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 C10orf120Q5SQS8 335 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 TPGS1Q6ZTW0 290 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 TTC39CQ8N584 583 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 TERB1Q8NA31 727 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 ANKRD52Q8NB46 1076 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 NDRG1Q92597 394 aaKnown RBP17.05■□□□□ 0.32
LMNA-222ENST00000508500 CLIC5Q9NZA1 410 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 DEC1Q9P2X7 70 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
LMNA-222ENST00000508500 DNMT3LQ9UJW3 386 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 CFAP47Q6ZTR5 3102 aa17.05■□□□□ 0.32
LMNA-222ENST00000508500 CKAP5Q14008 2032 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 ZFHX4Q86UP3 3567 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 ASCC3Q8N3C0 2202 aaKnown RBP17.04■□□□□ 0.32
LMNA-222ENST00000508500 TBC1D3BA6NDS4 549 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 PRRT4C9JH25 899 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 NEDD8-MDP1E9PL57 170 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 CACNG3O60359 315 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 CISD3P0C7P0 127 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 TYRP14679 529 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 MPLP40238 635 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 FMO5P49326 533 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 PSEN1P49768 467 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 PDE4CQ08493 712 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 GOLGA7BQ2TAP0 167 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 HSF5Q4G112 596 aaPredicted RBP17.04■□□□□ 0.32
LMNA-222ENST00000508500 TCEAL6Q6IPX3 200 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 TTI2Q6NXR4 508 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 TOGARAM2Q6ZUX3 1019 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 KAT5Q92993 513 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 TCEAL3Q969E4 200 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 DHTKD1Q96HY7 919 aaPredicted RBP17.04■□□□□ 0.32
LMNA-222ENST00000508500 ACOX2Q99424 681 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 BBS2Q9BXC9 721 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
LMNA-222ENST00000508500 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 TSPAN16Q9UKR8 245 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 PCDHGA5Q9Y5G8 931 aa17.04■□□□□ 0.32
LMNA-222ENST00000508500 RNF225M0QZC1 329 aaPredicted RBP17.03■□□□□ 0.32
LMNA-222ENST00000508500 FOXD2O60548 495 aaPredicted RBP17.03■□□□□ 0.32
LMNA-222ENST00000508500 GABBR2O75899 941 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 TKTL1P51854 596 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 MORC3Q14149 939 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 USP39Q53GS9 565 aaKnown RBP17.03■□□□□ 0.32
LMNA-222ENST00000508500 EOGTQ5NDL2 527 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 C10orf76Q5T2E6 689 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 EGFLAMQ63HQ2 1017 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 PMS2CLQ68D20 193 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 PM20D1Q6GTS8 502 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
LMNA-222ENST00000508500 TFAP2BQ92481 460 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
LMNA-222ENST00000508500 RASAL2Q9UJF2 1139 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 FBXO10Q9UK96 956 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 STARD13Q9Y3M8 1113 aa17.03■□□□□ 0.32
LMNA-222ENST00000508500 FRYQ5TBA9 3013 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 BCLAF3A2AJT9 711 aaKnown RBP17.02■□□□□ 0.32
LMNA-222ENST00000508500 PSMA7O14818 248 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 RHOBTB1O94844 696 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 CALCAP01258 141 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 RALAP11233 206 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 GBP1P32455 592 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 P2RY2P41231 377 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 WASP42768 502 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 EFEMP1Q12805 493 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 GRAMD4Q6IC98 578 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 KLHL10Q6JEL2 608 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 UBA3Q8TBC4 463 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 CEP63Q96MT8 703 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 ULBP1Q9BZM6 244 aa17.02■□□□□ 0.32
LMNA-222ENST00000508500 PLK2Q9NYY3 685 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms