RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 EXTL3O43909 919 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 VPS4BO75351 444 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ASMTLO95671 621 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 LSM8O95777 96 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 COX4I1P13073 169 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 MAGEA8P43361 318 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SPIRE1Q08AE8 756 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 PIGWQ7Z7B1 504 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TTC30AQ86WT1 665 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 PQLC1Q8N2U9 271 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RP9Q8TA86 221 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 POP5Q969H6 163 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ZCWPW1Q9H0M4 648 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 GANQ9H2C0 597 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 LRRC19Q9H756 370 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM39Q9HCM9 518 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SARS2Q9NP81 518 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 DNAJB4Q9UDY4 337 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ACOT9Q9Y305 439 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 KDM6AO15550 1401 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 LINC00854A0A1B0GVQ3 168 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 MAGEB16A2A368 324 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CD3EAPO15446 510 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 DCXO43602 365 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TM7SF2O76062 418 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ACADSBP45954 432 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CRKP46108 304 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SULT1E1P49888 294 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CCT8P50990 548 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NAA20P61599 178 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TROAPQ12815 778 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 FASTKQ14296 549 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 DGKDQ16760 1214 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 FUT11Q495W5 492 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ERFEQ4G0M1 354 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 COBLL1Q53SF7 1204 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GLRA4Q5JXX5 417 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GPAT2Q6NUI2 795 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GRPEL2Q8TAA5 225 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM193BQ96PV7 902 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NIF3L1Q9GZT8 377 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SPATA2Q9UM82 520 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 VPS9D1Q9Y2B5 631 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 EEF2KO00418 725 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ITGA2BP08514 1039 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ELK3P41970 407 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 PSEN1P49768 467 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC25A3Q00325 362 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ATP6AP1LQ52LC2 224 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZC2HC1CQ53FD0 456 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SPDYAQ5MJ70 313 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZDHHC13Q8IUH4 622 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TTC30BQ8N4P2 665 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC5A5Q92911 643 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TMEM121Q9BTD3 319 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SPRTNQ9H040 489 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TBCCD1Q9NVR7 557 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 COQ6Q9Y2Z9 468 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 PCDHA10Q9Y5I2 948 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ABCA6Q8N139 1617 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 A0A0U1RQJ8 604 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TRIM43BA6NCK2 446 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SAGE2PA6NJ88 616 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF263O14978 683 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZBTB24O43167 697 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 PRPF4O43172 522 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TNFRSF21O75509 655 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ANXA9O76027 345 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SUPT7LO94864 414 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GJB6O95452 261 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TGDSO95455 350 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CYP2C8P10632 490 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 PRDX5P30044 214 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GRIK1P39086 918 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GP5P40197 560 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF543Q08ER8 600 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CUL2Q13617 745 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ACAP1Q15027 740 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SF3B3Q15393 1217 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NRF1Q16656 503 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CYP51A1Q16850 503 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC10A5Q5PT55 438 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CYP4A22Q5TCH4 519 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 FOXR2Q6PJQ5 311 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TLCD1Q96CP7 247 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SGF29Q96ES7 293 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 PTCD3Q96EY7 689 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TNIP3Q96KP6 325 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NLRP4Q96MN2 994 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TCF12Q99081 682 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 C17orf75Q9HAS0 396 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF302Q9NR11 478 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 PLK2Q9NYY3 685 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GABBR1Q9UBS5 961 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ANAPC2Q9UJX6 822 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms