RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 Q6ZNB5 142 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 TTC30AQ86WT1 665 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 MIB1Q86YT6 1006 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 ERCC4Q92889 916 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 P2RY11Q96G91 374 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 GSDMAQ96QA5 445 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 BBS2Q9BXC9 721 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 FAM124BQ9H5Z6 455 aaPredicted RBP13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 DNAJC17Q9NVM6 304 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 NAGPAQ9UK23 515 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TRIM49BA6NDI0 452 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 STX10O60499 249 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 STC2O76061 302 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 CAVIN2O95810 425 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TYRP14679 529 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 P2RY2P41231 377 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 PSEN1P49768 467 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 PREPLQ4J6C6 727 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 RAB41Q5JT25 222 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 C10orf120Q5SQS8 335 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 STPG1Q5TH74 334 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 ARHGAP17Q68EM7 881 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 ANKRD40Q6AI12 368 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 GRAMD4Q6IC98 578 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TPGS1Q6ZTW0 290 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TRMT11Q7Z4G4 463 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 ZNF276Q8N554 614 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TTC39CQ8N584 583 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 KCNV2Q8TDN2 545 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 HMGB4Q8WW32 186 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 RLN3Q8WXF3 142 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 DDX1Q92499 740 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TATDN2Q93075 761 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 TMEM176AQ96HP8 235 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 DNAI2Q9GZS0 605 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 POLMQ9NP87 494 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 CLIC5Q9NZA1 410 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 LSM7Q9UK45 103 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 COQ4Q9Y3A0 265 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 STARD13Q9Y3M8 1113 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
HMGCS1-205ENST00000508319 PI4KAP42356 2102 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 LNP1A1A4G5 178 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 PLA2G4AP47712 749 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 LRRC63Q05C16 580 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CUL2Q13617 745 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 MAP7D1Q3KQU3 841 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 EGFLAMQ63HQ2 1017 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 TOGARAM2Q6ZUX3 1019 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CYP2U1Q7Z449 544 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 TADA2BQ86TJ2 420 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 PIGZQ86VD9 579 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 FRMD1Q8N878 549 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 SLC35C1Q96A29 364 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 SPACA7Q96KW9 195 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CNTNAP3BQ96NU0 1288 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 TSG101Q99816 390 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 EDEM2Q9BV94 578 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CNTNAP3Q9BZ76 1288 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 CD248Q9HCU0 757 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 WDR35Q9P2L0 1181 aa13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 MBD1Q9UIS9 605 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-205ENST00000508319 A0A1W2PQF6 199 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 GOLGA6L4A6NEF3 574 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 PATE3B3GLJ2 98 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 PRRT4C9JH25 899 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 SMC2O95347 1197 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 KLKB1P03952 638 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 RALAP11233 206 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 GABRG2P18507 467 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 NTSR1P30989 418 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 FKBP3Q00688 224 aaKnown RBP13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 NUDT18Q6ZVK8 323 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 BHLHA9Q7RTU4 235 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 UBR7Q8N806 425 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 ANKRD52Q8NB46 1076 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 BHMTQ93088 406 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 TIGD1Q96MW7 591 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 XPO6Q96QU8 1125 aaKnown RBP13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 ACOX2Q99424 681 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 GABRG3Q99928 467 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 RASAL2Q9UJF2 1139 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 TSPAN16Q9UKR8 245 aa13.66□□□□□ -0.22
HMGCS1-205ENST00000508319 TULP2O00295 520 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 PENKP01210 267 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms