RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	METTL5	Q9NRN9	209 aa	Known RBP	6	□□□□□ -1.45
ATXN3-210	ENST00000507965	SEMA4G	Q9NTN9	838 aa		6	□□□□□ -1.45
ATXN3-210	ENST00000507965	POLR3B	Q9NW08	1133 aa	Predicted RBP	6	□□□□□ -1.45
ATXN3-210	ENST00000507965	GTSE1	Q9NYZ3	720 aa		6	□□□□□ -1.45
ATXN3-210	ENST00000507965	LIMCH1	Q9UPQ0	1083 aa		6	□□□□□ -1.45
ATXN3-210	ENST00000507965	DNM3	Q9UQ16	869 aa		6	□□□□□ -1.45
ATXN3-210	ENST00000507965	CEP192	Q8TEP8	1941 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	VWA3A	A6NCI4	1184 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	LACTBL1	A8MY62	500 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	PRR5-ARHGAP8	B1AHC4	643 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965		K7ENM7	598 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	HNRNPDL	O14979	420 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	CLDN3	O15551	220 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	EXTL3	O43909	919 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	NUAK1	O60285	661 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	OAZ2	O95190	189 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ADRB1	P08588	477 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	RAC2	P15153	192 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	NME2	P22392	152 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	GABRR2	P28476	465 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	NMT1	P30419	496 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	GNA15	P30679	374 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	PRPH	P41219	470 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	CXCL12	P48061	93 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	PXN	P49023	591 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	KPNA1	P52294	538 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SLC12A3	P55017	1021 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ARHGAP8	P85298	464 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ATP2C1	P98194	919 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SIM2	Q14190	667 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	PDIA5	Q14554	519 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SF3A2	Q15428	464 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ZBTB6	Q15916	424 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	TMEM119	Q4V9L6	283 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ARSH	Q5FYA8	562 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	HYI	Q5T013	277 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	GPR158	Q5T848	1215 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	NAIF1	Q69YI7	327 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	OVOS1	Q6IE37	1185 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	JADE1	Q6IE81	842 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	CENPP	Q6IPU0	288 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SLC39A4	Q6P5W5	647 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ZPBP2	Q6X784	338 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	DSTYK	Q6XUX3	929 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ARID3B	Q8IVW6	561 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	YAF2	Q8IY57	180 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SPEM1	Q8N4L4	309 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	FAM184A	Q8NB25	1140 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	LEMD2	Q8NC56	503 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	APPL2	Q8NEU8	664 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	RIN3	Q8TB24	985 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ABHD4	Q8TB40	342 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	BICD1	Q96G01	975 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	KIF2C	Q99661	725 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SEPT5	Q99719	369 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	REEP2	Q9BRK0	252 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	NTPCR	Q9BSD7	190 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	RTKN	Q9BST9	563 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	IER2	Q9BTL4	223 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	RAB34	Q9BZG1	259 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SMOC1	Q9H4F8	434 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	SEMA3G	Q9NS98	782 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	RXFP3	Q9NSD7	469 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	RAB23	Q9ULC3	237 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	UBQLN1	Q9UMX0	589 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	ADAMTS9	Q9P2N4	1935 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	PLXND1	Q9Y4D7	1925 aa		5.99	□□□□□ -1.45
ATXN3-210	ENST00000507965	MYBPHL	A2RUH7	354 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	OTOL1	A6NHN0	477 aa	Predicted RBP	5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	OR6C75	A6NL08	312 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965		H3BS24	57 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	ETV2	O00321	342 aa	Predicted RBP	5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	SLC30A4	O14863	429 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	CHAD	O15335	359 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	PAPSS2	O95340	614 aa	Predicted RBP	5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	RET	P07949	1114 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	CLTA	P09496	248 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	PLA2G4B	P0C869	781 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	MED14OS	P0DP75	135 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	ODC1	P11926	461 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	GLDC	P23378	1020 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	MARCKS	P29966	332 aa	Predicted RBP	5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	ALDH1A3	P47895	512 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	GPR15	P49685	360 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	LIG4	P49917	911 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	EPHB3	P54753	998 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	LILRA4	P59901	499 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	HMGN5	P82970	282 aa	Known RBP	5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	GRIN1	Q05586	938 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	PSMD2	Q13200	908 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	GPR17	Q13304	367 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	LRRC32	Q14392	662 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	DHX8	Q14562	1220 aa	Known RBP	5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	PPP2R5D	Q14738	602 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	CSRP2	Q16527	193 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	ST3GAL2	Q16842	350 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	CCDC142	Q17RM4	750 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	SLC39A12	Q504Y0	691 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	C9orf57	Q5W0N0	161 aa		5.98	□□□□□ -1.45
ATXN3-210	ENST00000507965	SCARA3	Q6AZY7	606 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms