RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 KLRC4O43908 158 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 PPP6R2O75170 966 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 ZDHHC11BP0C7U3 371 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 ADH5P11766 374 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 YWHAQP27348 245 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 DHPSP49366 369 aaPredicted RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 SLC5A3P53794 718 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 TNNC1P63316 161 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 DLG4P78352 724 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 MRPS21P82921 87 aaKnown RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 CUL4BQ13620 913 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 FOXD4L6Q3SYB3 417 aaPredicted RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 USP39Q53GS9 565 aaKnown RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 SH3PXD2AQ5TCZ1 1133 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 FOXD4L3Q6VB84 417 aaPredicted RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 SCARA5Q6ZMJ2 495 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 UNC13DQ70J99 1090 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 GPRIN1Q7Z2K8 1008 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 CYP2U1Q7Z449 544 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 TMEM25Q86YD3 366 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 BBS7Q8IWZ6 715 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 FUKQ8N0W3 1084 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 NAT16Q8N8M0 369 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 PIGKQ92643 395 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 ERLEC1Q96DZ1 483 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 SMOQ99835 787 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 ELOVL4Q9GZR5 314 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 ZSCAN16Q9H4T2 348 aaPredicted RBP9.55□□□□□ -0.88
RPS3A-206ENST00000507485 CD248Q9HCU0 757 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 CD93Q9NPY3 652 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 ARHGEF4Q9NR80 690 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 GMIPQ9P107 970 aa9.55□□□□□ -0.88
RPS3A-206ENST00000507485 PCDH15Q96QU1 1955 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 CEP192Q8TEP8 1941 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 E2F8A0AVK6 867 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 FAM92AA1XBS5 289 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
RPS3A-206ENST00000507485 SPINT1O43278 529 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 CUTAO60888 179 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 TULP3O75386 442 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
RPS3A-206ENST00000507485 FAM163BP0C2L3 166 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 CCDC130P13994 396 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 EIF2DP41214 584 aaKnown RBP9.54□□□□□ -0.88
RPS3A-206ENST00000507485 WASP42768 502 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 PPP3CCP48454 512 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 PDE6CP51160 858 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 ZNF252P-AS1Q0IIN9 211 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 RNFT1Q5M7Z0 435 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 C1orf220Q5T0J3 134 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 SNX30Q5VWJ9 437 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 SV2AQ7L0J3 742 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 ACOT1Q86TX2 421 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 C12orf56Q8IXR9 622 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 NUP93Q8N1F7 819 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 KIAA1958Q8N8K9 716 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 PARD3BQ8TEW8 1205 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 HMGB4Q8WW32 186 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 FBXO32Q969P5 355 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 EXOC4Q96A65 974 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
RPS3A-206ENST00000507485 SLITRK1Q96PX8 696 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 TWNKQ96RR1 684 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 ACOX2Q99424 681 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 CUEDC2Q9H467 287 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 PCDHA7Q9UN72 937 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 R3HCC1Q9Y3T6 440 aaKnown RBP9.54□□□□□ -0.88
RPS3A-206ENST00000507485 CACNA1EQ15878 2313 aa9.54□□□□□ -0.88
RPS3A-206ENST00000507485 UBE4BO95155 1302 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 A0A1W2PQF6 199 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 TCRBV21S2A2A0A5A6 115 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 K7ELQ4 463 aaPredicted RBP9.53□□□□□ -0.88
RPS3A-206ENST00000507485 KHNYNO15037 678 aaKnown RBP9.53□□□□□ -0.88
RPS3A-206ENST00000507485 ZZEF1O43149 2961 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 HOXC11O43248 304 aaPredicted RBP9.53□□□□□ -0.88
RPS3A-206ENST00000507485 YEATS4O95619 227 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 TBX18O95935 607 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 APODP05090 189 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 IRF1P10914 325 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 GABRG2P18507 467 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 GRIA2P42262 883 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 PI4KAP42356 2102 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 AFMP43652 599 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 CLDN10P78369 228 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 STK4Q13043 487 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 PKP1Q13835 747 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 SPOPLQ6IQ16 392 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 DEFB119Q8N690 84 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 IQUBQ8NA54 791 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 KIAA0895Q8NCT3 520 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 OR2I1PQ8NGU4 316 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 TMEM9BQ9NQ34 198 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 KRT82Q9NSB4 513 aa9.53□□□□□ -0.88
RPS3A-206ENST00000507485 DMAC2Q9NW81 257 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms