RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ARHGEF3Q9NR81 526 aa4□□□□□ -1.77
LSM6-205ENST00000507449 SERTAD4Q9NUC0 356 aa4□□□□□ -1.77
LSM6-205ENST00000507449 DLL3Q9NYJ7 618 aa4□□□□□ -1.77
LSM6-205ENST00000507449 CNTN6Q9UQ52 1028 aa4□□□□□ -1.77
LSM6-205ENST00000507449 LOC105369274A0A096LPK9 316 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 LOC102723532A0A0G2JNH3 316 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 A8MVJ9 347 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 KIF28PB7ZC32 967 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 H0Y3Z8 333 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 H0YIZ8 118 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 M0QYT0 321 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 AP4M1O00189 453 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 CYR61O00622 381 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 MGST3O14880 152 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 KIAA0355O15063 1070 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 CA12O43570 354 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 PPP6R2O75170 966 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 URI1O94763 535 aaPredicted RBP3.99□□□□□ -1.77
LSM6-205ENST00000507449 NXPH3O95157 252 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 CER1O95813 267 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 ONECUT2O95948 504 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 CYP21A2P08686 494 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 TMEM225BP0DP42 221 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 HSD3B1P14060 373 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 MAKP20794 623 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 DRD1P21728 446 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 CCT5P48643 541 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 TPTEP56180 551 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 MPP3Q13368 585 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 TTC22Q5TAA0 569 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 CYP26C1Q6V0L0 522 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 RFX8Q6ZV50 586 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 RRAGAQ7L523 313 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 HERC6Q8IVU3 1022 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 NRSN1Q8IZ57 195 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 OR4N4Q8N0Y3 316 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.99□□□□□ -1.77
LSM6-205ENST00000507449 RP9Q8TA86 221 aaKnown RBP3.99□□□□□ -1.77
LSM6-205ENST00000507449 ACTRT2Q8TDY3 377 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 PDLIM2Q96JY6 352 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 PAAF1Q9BRP4 392 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 THAP7Q9BT49 309 aaPredicted RBP3.99□□□□□ -1.77
LSM6-205ENST00000507449 FAM167BQ9BTA0 163 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 MECRQ9BV79 373 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 SAP30LQ9HAJ7 183 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 DUSP22Q9NRW4 184 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 NKX1-2Q9UD57 310 aaPredicted RBP3.99□□□□□ -1.77
LSM6-205ENST00000507449 FEM1BQ9UK73 627 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 LZTS1Q9Y250 596 aa3.99□□□□□ -1.77
LSM6-205ENST00000507449 HMX3A6NHT5 357 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 PSMD9O00233 223 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 MBPP02686 304 aaPredicted RBP3.98□□□□□ -1.77
LSM6-205ENST00000507449 PRKCBP05771 671 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 CKMT1AP12532 417 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 ALADP13716 330 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 CD19P15391 556 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 ENGP17813 658 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 FPR3P25089 353 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 CYP2C18P33260 490 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 ADD2P35612 726 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 PLA2G5P39877 138 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 GRIA3P42263 894 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 DIO1P49895 249 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 PDE1AP54750 535 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 POLE2P56282 527 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 FAM3BP58499 235 aaPredicted RBP3.98□□□□□ -1.77
LSM6-205ENST00000507449 MRPS35P82673 323 aaKnown RBP3.98□□□□□ -1.77
LSM6-205ENST00000507449 CUL4BQ13620 913 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 ST3GAL2Q16842 350 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 GALNTL6Q49A17 601 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 HSP90AB4PQ58FF6 505 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 CCDC144NLQ6NUI1 221 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 LVRNQ6Q4G3 990 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 PTCHD4Q6ZW05 846 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 ZNF551Q7Z340 670 aaPredicted RBP3.98□□□□□ -1.77
LSM6-205ENST00000507449 TRABD2AQ86V40 505 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 RAB11FIP4Q86YS3 637 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 ULK2Q8IYT8 1036 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 LRRC71Q8N4P6 559 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 SPPL3Q8TCT6 385 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 CSGALNACT1Q8TDX6 532 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 SLC22A17Q8WUG5 538 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 UBXN10Q96LJ8 280 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 DPCDQ9BVM2 203 aaPredicted RBP3.98□□□□□ -1.77
LSM6-205ENST00000507449 FSD1LQ9BXM9 530 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 SAYSD1Q9NPB0 183 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 RRN3Q9NYV6 651 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 C9orf78Q9NZ63 289 aaPredicted RBP3.98□□□□□ -1.77
LSM6-205ENST00000507449 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.98□□□□□ -1.77
LSM6-205ENST00000507449 PCDHB7Q9Y5E2 793 aa3.98□□□□□ -1.77
LSM6-205ENST00000507449 CCDC187A0A096LP49 1063 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 EIF3FO00303 357 aaPredicted RBP3.97□□□□□ -1.77
LSM6-205ENST00000507449 CES2O00748 559 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 ZNF213O14771 459 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 NCAM2O15394 837 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 PRAMEF2O60811 474 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 PDE8BO95263 885 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 EBLN1P0CF75 366 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 CREB1P16220 341 aa3.97□□□□□ -1.77
LSM6-205ENST00000507449 AVPR1BP47901 424 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms