RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RAB6CQ9H0N0 254 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 S1PR5Q9H228 398 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 GOLPH3Q9H4A6 298 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 CCSER2Q9H7U1 834 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 PIDD1Q9HB75 910 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 CLIC5Q9NZA1 410 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 CALCOCO1Q9P1Z2 691 aa14.83□□□□□ -0.04
RNF4-208ENST00000507247 GRID2IPA4D2P6 1211 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 C2orf78A6NCI8 922 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 TMEM110-MUSTN1A8MSY1 372 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 CAPN9O14815 690 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 MDM4O15151 490 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 NCK2O43639 380 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 BUB1BO60566 1050 aaPredicted RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 TBX18O95935 607 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 OAS1P00973 400 aaKnown RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 RALAP11233 206 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 HOXB8P17481 243 aaPredicted RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 PSMA2P25787 234 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 CDC25CP30307 473 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 PTPN9P43378 593 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 PPP3CCP48454 512 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 SULT1E1P49888 294 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 NAP1L1P55209 391 aaKnown RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 MESDQ14696 234 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 CCDC85BQ15834 202 aaPredicted RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 PABPC1LQ4VXU2 614 aaKnown RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 STXBP5Q5T5C0 1151 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 SH3PXD2AQ5TCZ1 1133 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 DAB2IPQ5VWQ8 1189 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 MSANTD2Q6P1R3 559 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 PDZD4Q76G19 769 aaPredicted RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 DQX1Q8TE96 717 aaKnown RBP14.82□□□□□ -0.04
RNF4-208ENST00000507247 NT5C3BQ969T7 300 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 MSLNLQ96KJ4 702 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 TBCBQ99426 244 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 TRIM62Q9BVG3 475 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 ATXN3LQ9H3M9 355 aa14.82□□□□□ -0.04
RNF4-208ENST00000507247 NUP210Q8TEM1 1887 aaPredicted RBP14.81□□□□□ -0.04
RNF4-208ENST00000507247 GOLGA6L9A6NEM1 432 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 MYO1FO00160 1098 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 COCHO43405 550 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 TLR5O60602 858 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 SDC4P31431 198 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 ATXN1P54253 815 aaKnown RBP14.81□□□□□ -0.04
RNF4-208ENST00000507247 ATP11AP98196 1134 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 TEAD2Q15562 447 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 CDO1Q16878 200 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 SLC25A52Q3SY17 297 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 TXNDC8Q6A555 127 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 POTEHQ6S545 545 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 BNIPLQ7Z465 357 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 TAC4Q86UU9 113 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 ZSCAN30Q86W11 494 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 ZNF276Q8N554 614 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 RNF10Q8N5U6 811 aaKnown RBP14.81□□□□□ -0.04
RNF4-208ENST00000507247 ARFGAP1Q8N6T3 406 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 LRRC57Q8N9N7 239 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 LEMD2Q8NC56 503 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 ADAM32Q8TC27 787 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 RNF139Q8WU17 664 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 GCNAQ96QF7 691 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 SLC22A12Q96S37 553 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 CNPY3Q9BT09 278 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 RNF38Q9H0F5 515 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 ADAM7Q9H2U9 754 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 SMOC2Q9H3U7 446 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 TRPC7Q9HCX4 862 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 IP6K2Q9UHH9 426 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 SFMBT1Q9UHJ3 866 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 STAP1Q9ULZ2 295 aa14.81□□□□□ -0.04
RNF4-208ENST00000507247 M0QYT0 321 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 MSI1O43347 362 aaKnown RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 PALMO75781 387 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 PROSCO94903 275 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 FGF19O95750 216 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 OLFM2O95897 454 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 TRUB2O95900 331 aaKnown RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 IGLV3-25P01717 112 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 CEBPBP17676 345 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 TUBP50607 506 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 ITIH3Q06033 890 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 EFEMP1Q12805 493 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 PIGHQ14442 188 aaPredicted RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 C10orf120Q5SQS8 335 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 HECTD3Q5T447 861 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 C11orf63Q6NUN7 778 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 RSRC2Q7L4I2 434 aaKnown RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 NIPA2Q8N8Q9 360 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 ITFG1Q8TB96 612 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 FAM172AQ8WUF8 416 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 ING5Q8WYH8 240 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 MRPS31Q92665 395 aaKnown RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 CENPIQ92674 756 aaPredicted RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 COL25A1Q9BXS0 654 aaPredicted RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 OLA1Q9NTK5 396 aaKnown RBP14.8□□□□□ -0.04
RNF4-208ENST00000507247 RRN3Q9NYV6 651 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 HYOU1Q9Y4L1 999 aa14.8□□□□□ -0.04
RNF4-208ENST00000507247 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms