RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CUL2Q13617 745 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 SGO2Q562F6 1265 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 C10orf76Q5T2E6 689 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 ANKRD40Q6AI12 368 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 GPRIN1Q7Z2K8 1008 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 SLC4A11Q8NBS3 891 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 MDGA1Q8NFP4 955 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 JAKMIP2Q96AA8 810 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 NMUR1Q9HB89 426 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 DNAJC17Q9NVM6 304 aaKnown RBP15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 BCCIPQ9P287 314 aaKnown RBP eCLIP15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 DCDC2BA2VCK2 349 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 NEDD8-MDP1E9PL57 170 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 SGK1O00141 431 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 SCAMP3O14828 347 aaKnown RBP15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 XPO1O14980 1071 aaKnown RBP15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 GREM1O60565 184 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 GNA14O95837 355 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 TBX18O95935 607 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 CYBBP04839 570 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 SETSIPP0DME0 302 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 VDRP11473 427 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 TYRP14679 529 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 NTSR1P30989 418 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 HOXD12P35452 270 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 P2RY2P41231 377 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 STILQ15468 1287 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 RAB41Q5JT25 222 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 SLC36A4Q6YBV0 504 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 Q6ZNB5 142 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 RSRC2Q7L4I2 434 aaKnown RBP15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 LPCAT2Q7L5N7 544 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 NAT16Q8N8M0 369 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 SLC35C1Q96A29 364 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 LRRC4Q9HBW1 653 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 OSER1Q9NX31 292 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 MYOFQ9NZM1 2061 aa15.15■□□□□ 0.02
HMGCS1-203ENST00000507004 MYO18AQ92614 2054 aaKnown RBP15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 KHNYNO15037 678 aaKnown RBP15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 MAP3K13O43283 966 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 ZNF217O75362 1048 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 STC2O76061 302 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 ADRB1P08588 477 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 PAEPP09466 180 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 HOXC13P31276 330 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 DGKGP49619 791 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 BST2Q10589 180 aaKnown RBP15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 CYP2U1Q7Z449 544 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 RABEPKQ7Z6M1 372 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 SCD5Q86SK9 330 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 SCML4Q8N228 414 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 PGBD3Q8N328 593 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 UCMAQ8WVF2 138 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 PLD4Q96BZ4 506 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 EEF2KMTQ96G04 330 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 IRX2Q9BZI1 471 aaPredicted RBP15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 TPSD1Q9BZJ3 242 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 POLR3BQ9NW08 1133 aaPredicted RBP15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 RASAL2Q9UJF2 1139 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 SLC27A6Q9Y2P4 619 aa15.14■□□□□ 0.01
HMGCS1-203ENST00000507004 EML5Q05BV3 1969 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 TCRBV21S2A2A0A5A6 115 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 FGFR1OPO95684 399 aaKnown RBP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 ZBED1O96006 694 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 CHRM1P11229 460 aaPredicted RBP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 HOXB2P14652 356 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 FMO5P49326 533 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 PGFP49763 221 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 TKTL1P51854 596 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 YWHAGP61981 247 aaKnown RBP eCLIP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 SF3A2Q15428 464 aaKnown RBP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 CCDC40Q4G0X9 1142 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 PPM1JQ5JR12 505 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 STPG1Q5TH74 334 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 DAB2IPQ5VWQ8 1189 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 RNF43Q68DV7 783 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 SMYD5Q6GMV2 418 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 TPGS1Q6ZTW0 290 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 TTC30AQ86WT1 665 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 MIB1Q86YT6 1006 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 CHPFQ8IZ52 775 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 CPXM2Q8N436 756 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 RNF139Q8WU17 664 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 KCTD13Q8WZ19 329 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 TATDN2Q93075 761 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 SLC2A11Q9BYW1 496 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 CNGB3Q9NQW8 809 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 MARCH2Q9P0N8 246 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 EVLQ9UI08 416 aaPredicted RBP15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 FBXO10Q9UK96 956 aa15.13■□□□□ 0.01
HMGCS1-203ENST00000507004 TSPAN16Q9UKR8 245 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms