RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 HGSNATQ68CP4 663 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 DENND1BQ6P3S1 775 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 OLFML1Q6UWY5 402 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 MON1BQ7L1V2 547 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 RSRC2Q7L4I2 434 aaKnown RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 STRADAQ7RTN6 431 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 PSTKQ8IV42 348 aaKnown RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 YAF2Q8IY57 180 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 HS6ST3Q8IZP7 471 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 CPXM2Q8N436 756 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 WDTC1Q8N5D0 677 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 UBA3Q8TBC4 463 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 ADAMTS19Q8TE59 1207 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 CCDC42Q96M95 316 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 PPP1R9BQ96SB3 815 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 CPXM1Q96SM3 734 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 UHRF1Q96T88 793 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 TRMT61BQ9BVS5 477 aaKnown RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 SLC46A2Q9BY10 475 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 NACA2Q9H009 215 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 HAUS4Q9H6D7 363 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 KCNK12Q9HB15 430 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 ST7Q9NRC1 585 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 ADAM22Q9P0K1 906 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 GMIPQ9P107 970 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 UVRAGQ9P2Y5 699 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 NAGPAQ9UK23 515 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 AJAP1Q9UKB5 411 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 MRPS17Q9Y2R5 130 aaKnown RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 DLL1O00548 723 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 CAPN9O14815 690 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 PAPSS1O43252 624 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-205ENST00000506880 COCHO43405 550 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 SOAT2O75908 522 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 ENDOD1O94919 500 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 NFATC1O95644 943 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 IGLV3-25P01717 112 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 IGLV3-27P01718 113 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 CHRNB2P17787 502 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 FCARP24071 287 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 GPR15P49685 360 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 KCNQ1P51787 676 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 OXCT1P55809 520 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 ORC1Q13415 861 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 EIF4EBP2Q13542 120 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-205ENST00000506880 CLUL1Q15846 466 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 SLC25A52Q3SY17 297 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 FAM78AQ5JUQ0 283 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 C10orf120Q5SQS8 335 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 PLEKHA7Q6IQ23 1121 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 ALKBH5Q6P6C2 394 aaKnown RBP8.84□□□□□ -0.99
PDGFC-205ENST00000506880 SND1Q7KZF4 910 aaKnown RBP eCLIP8.84□□□□□ -0.99
PDGFC-205ENST00000506880 BHLHA9Q7RTU4 235 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 GPRIN1Q7Z2K8 1008 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 BMP8AQ7Z5Y6 402 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 SCD5Q86SK9 330 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 XYLT1Q86Y38 959 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 RHOT2Q8IXI1 618 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 FAM217AQ8IXS0 508 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 MCOLN2Q8IZK6 566 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 MAB21L3Q8N8X9 362 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 OSCP1Q8WVF1 389 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 TCEAL4Q96EI5 215 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 RPGRIP1Q96KN7 1286 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 DDX23Q9BUQ8 820 aaKnown RBP8.84□□□□□ -0.99
PDGFC-205ENST00000506880 KLF16Q9BXK1 252 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-205ENST00000506880 SLC2A11Q9BYW1 496 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 DEF6Q9H4E7 631 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 GRPEL1Q9HAV7 217 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 MARCH2Q9P0N8 246 aa8.84□□□□□ -0.99
PDGFC-205ENST00000506880 DOCK4Q8N1I0 1966 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 A0A0A6YYK5 440 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 A0A1W2PQH9 124 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 YJEFN3A6XGL0 299 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 HEPACAM2A8MVW5 462 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 E7ENQ6 273 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 ZNF263O14978 683 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 NPC1O15118 1278 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 DCXO43602 365 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 ADH1CP00326 375 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 APOEP02649 317 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 H2AFZP0C0S5 128 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 MBL2P11226 248 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 KRT3P12035 628 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 NCAM1P13591 858 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 CCR1P32246 355 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 SLC11A2P49281 568 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 HADHBP55084 474 aaKnown RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 NRG1Q02297 640 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 APBA1Q02410 837 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 SIGLEC14Q08ET2 396 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 MTF1Q14872 753 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 CCDC142Q17RM4 750 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 ASTE1Q2TB18 679 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 HSF5Q4G112 596 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms