RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 DCLK3Q9C098 648 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 EPC1Q9H2F5 836 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 CNGB3Q9NQW8 809 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 ARHGEF4Q9NR80 690 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 MARCH2Q9P0N8 246 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 RAB23Q9ULC3 237 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 CNTN6Q9UQ52 1028 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 OTOGLQ3ZCN5 2332 aa16.33■□□□□ 0.2
CLDND1-211ENST00000506575 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 K7EQS6 105 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 GREM1O60565 184 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 STC2O76061 302 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 FRYLO94915 3013 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 LETM1O95202 739 aaPredicted RBP16.32■□□□□ 0.2
CLDND1-211ENST00000506575 KAT7O95251 611 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 HMBSP08397 361 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 HOXA6P31267 233 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 GRIA2P42262 883 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 C2orf27AQ580R0 203 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 PMF1Q6P1K2 205 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 GJB7Q6PEY0 223 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 TPGS1Q6ZTW0 290 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 NUDT18Q6ZVK8 323 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 C12orf40Q86WS4 652 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 NAT16Q8N8M0 369 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 SUMF1Q8NBK3 374 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
CLDND1-211ENST00000506575 RUBCNQ92622 972 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 GOLGA1Q92805 767 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 HSFY1Q96LI6 401 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
CLDND1-211ENST00000506575 BBS2Q9BXC9 721 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 DEC1Q9P2X7 70 aa16.32■□□□□ 0.2
CLDND1-211ENST00000506575 SMG5Q9UPR3 1016 aaKnown RBP16.32■□□□□ 0.2
CLDND1-211ENST00000506575 SLC12A8A0AV02 714 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 PIK3R2O00459 728 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 THAP12O43422 761 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 FBXO21O94952 628 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 MBD3O95983 291 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 PON1P27169 355 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 GNA15P30679 374 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 CORO1AP31146 461 aaKnown RBP16.31■□□□□ 0.2
CLDND1-211ENST00000506575 CNR2P34972 360 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 DAOAP59103 153 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 DMWDQ09019 674 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 DMC1Q14565 340 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 VWA3BQ502W6 1294 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 BSPRYQ5W0U4 402 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 Q6ZNB5 142 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 PRR23BQ6ZRT6 265 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 SYT13Q7L8C5 426 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 SCML4Q8N228 414 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 IRGQQ8WZA9 623 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 EDEM1Q92611 657 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 NCDNQ9UBB6 729 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 GPR179Q6PRD1 2367 aa16.31■□□□□ 0.2
CLDND1-211ENST00000506575 CFAP54Q96N23 3096 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 TBC1D3BA6NDS4 549 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 YJEFN3A6XGL0 299 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 E7ENQ6 273 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 TULP3O75386 442 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 TYRP14679 529 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
CLDND1-211ENST00000506575 CHKAP35790 457 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 TNFRSF4P43489 277 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 PXNP49023 591 aaPredicted RBP16.3■□□□□ 0.2
CLDND1-211ENST00000506575 MRPS21P82921 87 aaKnown RBP16.3■□□□□ 0.2
CLDND1-211ENST00000506575 APBA1Q02410 837 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 MEA1Q16626 185 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 WDR5BQ86VZ2 330 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 FMNL3Q8IVF7 1028 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 ETFBKMTQ8IXQ9 262 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 ZNF606Q8WXB4 792 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 PLD4Q96BZ4 506 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 HHIPQ96QV1 700 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 SAMSN1Q9NSI8 373 aaKnown RBP16.3■□□□□ 0.2
CLDND1-211ENST00000506575 DNAJC17Q9NVM6 304 aaKnown RBP16.3■□□□□ 0.2
CLDND1-211ENST00000506575 MARK1Q9P0L2 795 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 NFE2L3Q9Y4A8 694 aa16.3■□□□□ 0.2
CLDND1-211ENST00000506575 SPTBN4Q9H254 2564 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 CCDC163A0A0D9SF12 145 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 GPD2P43304 727 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 ACADSBP45954 432 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 HARS2P49590 506 aaKnown RBP16.29■□□□□ 0.2
CLDND1-211ENST00000506575 MESP2Q0VG99 397 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 SIM2Q14190 667 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-211ENST00000506575 TCP11X2Q5H9J9 407 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 MIIPQ5JXC2 388 aa16.29■□□□□ 0.2
CLDND1-211ENST00000506575 GRAMD4Q6IC98 578 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms