RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CHD8Q9HCK8 2581 aa17.59■□□□□ 0.41
PDLIM7-215ENST00000506161 A0A0A0MRY4 1105 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 PIK3R2O00459 728 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 SLC30A4O14863 429 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 PMM2O15305 246 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 ATG13O75143 517 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 ADH1CP00326 375 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 HMBSP08397 361 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 CD19P15391 556 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 MARSP56192 900 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 UBE2HP62256 183 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 GAD2Q05329 585 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 EFEMP1Q12805 493 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 TMEM270Q6UE05 265 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 FRMD1Q8N878 549 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 TXNDC5Q8NBS9 432 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 OTUB2Q96DC9 234 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 SMOC1Q9H4F8 434 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 ARHGEF4Q9NR80 690 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 PLK2Q9NYY3 685 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 RALYQ9UKM9 306 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 MMP17Q9ULZ9 603 aa17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 MUC22E2RYF6 1773 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-215ENST00000506161 AXIN1O15169 862 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 RPP40O75818 363 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 KLF8O95600 359 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 BCKDHBP21953 392 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 EIF2DP41214 584 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 RGS7P49802 495 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 ZNF132P52740 706 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 ADIGQ0VDE8 80 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 ANO4Q32M45 955 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 SGO2Q562F6 1265 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 PM20D1Q6GTS8 502 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 KLHDC10Q6PID8 442 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 CEP68Q76N32 757 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 CAMKK1Q8N5S9 505 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 EHBP1Q8NDI1 1231 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 MDGA1Q8NFP4 955 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 CLEC4CQ8WTT0 213 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 BHMTQ93088 406 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 ERLEC1Q96DZ1 483 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 NT5C1BQ96P26 610 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 ACOX2Q99424 681 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 GTPBP4Q9BZE4 634 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 UBXN6Q9BZV1 441 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 ACP6Q9NPH0 428 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 RXFP3Q9NSD7 469 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 CLIC5Q9NZA1 410 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 DNMT3LQ9UJW3 386 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 AJAP1Q9UKB5 411 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 RAB23Q9ULC3 237 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 CLEC4EQ9ULY5 219 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 PCDHB4Q9Y5E5 795 aa17.57■□□□□ 0.4
PDLIM7-215ENST00000506161 BAHCC1Q9P281 2608 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 CCDC163A0A0D9SF12 145 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 PRRT4C9JH25 899 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 E7ENQ6 273 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 NEDD8-MDP1E9PL57 170 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 XPO1O14980 1071 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 GDF9O60383 454 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 APODP05090 189 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 RETP07949 1114 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 CISD3P0C7P0 127 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 VDRP11473 427 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 CNR2P34972 360 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 BCAT1P54687 386 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 YWHAGP61981 247 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 BST2Q10589 180 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 COL9A2Q14055 689 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 PMF1Q6P1K2 205 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 RASSF3Q86WH2 238 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 ZNF276Q8N554 614 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 RBBP8NLQ8NC74 664 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 ACDQ96AP0 544 aa17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 DUSP15Q9H1R2 295 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-215ENST00000506161 ADAMTS9Q9P2N4 1935 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 BICDL2A1A5D9 508 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 CACNG3O60359 315 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 APBB3O95704 486 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 ZBED1O96006 694 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 TYRP14679 529 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 TBXAS1P24557 533 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 PPP1R2P41236 205 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 GRIA2P42262 883 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 WASP42768 502 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 DGKEP52429 567 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 SF3A2Q15428 464 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 CRY1Q16526 586 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 PLK5Q496M5 336 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 EGFLAMQ63HQ2 1017 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 ANO7Q6IWH7 933 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms