RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NOTCH1P46531 2555 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 TLN2Q9Y4G6 2542 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 PRAMEF33A0A0G2JMD5 474 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 HEATR9A2RTY3 570 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 C9orf172C9J069 976 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 TLR4O00206 839 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SLC9A3R1O14745 358 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ZBTB24O43167 697 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PRICKLE3O43900 615 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PRAMEF10O60809 474 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 OAS1P00973 400 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 CD99P14209 185 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 HGFP14210 728 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PFKLP17858 780 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 MX1P20591 662 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 DGKAP23743 735 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ITGB7P26010 798 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 CD38P28907 300 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 MARCKSP29966 332 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 UGT1A5P35504 534 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ETV5P41161 510 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 GNAQP50148 359 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ZNF132P52740 706 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 BCAT1P54687 386 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 USP46P62068 366 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 DAB2P98082 770 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 HNRNPUQ00839 825 aaKnown RBP eCLIP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SSRP1Q08945 709 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PPP2R5CQ13362 524 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PRPF4BQ13523 1007 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 KCNB1Q14721 858 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 DDR2Q16832 855 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 IMMTQ16891 758 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SLC10A6Q3KNW5 377 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 Q4G0T1 1027 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 XKR9Q5GH70 373 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 KIAA0895LQ68EN5 471 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 GRAMD4Q6IC98 578 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SDE2Q6IQ49 451 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 GUSBP11Q6P575 273 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 RBM44Q6ZP01 1051 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 TMC6Q7Z403 805 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 GDF7Q7Z4P5 450 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 TICAM2Q86XR7 235 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 RAB11FIP4Q86YS3 637 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 BBS7Q8IWZ6 715 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 KCTD17Q8N5Z5 321 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ZSCAN1Q8NBB4 408 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 TTC13Q8NBP0 860 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PRR7Q8TB68 274 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 IFI44Q8TCB0 444 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 MAPK15Q8TD08 544 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 C2orf15Q8WU43 125 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 CCDC136Q96JN2 1154 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ADPGKQ9BRR6 497 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 LXNQ9BS40 222 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ZMYND12Q9H0C1 365 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 POLR3FQ9H1D9 316 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 CBX8Q9HC52 389 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PRDM8Q9NQV8 689 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SPHK2Q9NRA0 654 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 GJB4Q9NTQ9 266 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 DNAJC17Q9NVM6 304 aaKnown RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SMPD4Q9NXE4 827 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 ABI2Q9NYB9 513 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 RGL1Q9NZL6 768 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 CFAP97Q9P2B7 532 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 UXTQ9UBK9 157 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SERGEFQ9UGK8 458 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 FBXO10Q9UK96 956 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SLC5A6Q9Y289 635 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 RPH3AQ9Y2J0 694 aaPredicted RBP3.59□□□□□ -1.83
TCOF1-208ENST00000506063 PCDHB6Q9Y5E3 794 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SNX14Q9Y5W7 946 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 CPQQ9Y646 472 aa3.59□□□□□ -1.83
TCOF1-208ENST00000506063 SVEP1Q4LDE5 3571 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 MYH11P35749 1972 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 NCOA6Q14686 2063 aaPredicted RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 CYP3A7-CYP3A51PA0A087WV96 503 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 FAM221AA4D161 298 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF840PA6NDX5 716 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 LRRIQ4A6NIV6 560 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 NTN3O00634 580 aaPredicted RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 SH2B2O14492 632 aaPredicted RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 NKX2-8O15522 239 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 DUX1O43812 170 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TCEA3O75764 348 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 DGAT1O75907 488 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TDP2O95551 362 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 P4HBP07237 508 aaKnown RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 CYP21A2P08686 494 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 LIFP15018 202 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 PROZP22891 400 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 CYP3A7P24462 503 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 CYP2F1P24903 491 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 OAS2P29728 719 aaKnown RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 PTGER4P35408 488 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 HARS2P49590 506 aaKnown RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 RARRES1P49788 294 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms