RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 SPACA7Q96KW9 195 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 KLF16Q9BXK1 252 aaPredicted RBP10.96□□□□□ -0.65
NR1I3-222ENST00000506018 DCLK3Q9C098 648 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 NUP62CLQ9H1M0 184 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
NR1I3-222ENST00000506018 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 BCCIPQ9P287 314 aaKnown RBP eCLIP10.96□□□□□ -0.65
NR1I3-222ENST00000506018 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 KIAA1257Q9ULG3 409 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 COQ4Q9Y3A0 265 aa10.96□□□□□ -0.65
NR1I3-222ENST00000506018 A0A0A0MRY4 1105 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 TRIM49BA6NDI0 452 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 EPN2O95208 641 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 GNA14O95837 355 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 CD19P15391 556 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 GBP1P32455 592 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 CHKAP35790 457 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 SLC6A11P48066 632 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 RAD23BP54727 409 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 E2F5Q15329 346 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 CRY1Q16526 586 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 GAB4Q2WGN9 574 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 AASDHQ4L235 1098 aaPredicted RBP10.95□□□□□ -0.66
NR1I3-222ENST00000506018 ISM2Q6H9L7 571 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 GRAMD4Q6IC98 578 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 SDE2Q6IQ49 451 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 ANO7Q6IWH7 933 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 KLHL10Q6JEL2 608 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 CAVIN1Q6NZI2 390 aaKnown RBP10.95□□□□□ -0.66
NR1I3-222ENST00000506018 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 GPRIN1Q7Z2K8 1008 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 KBTBD6Q86V97 674 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 CCDC33Q8N5R6 958 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 DDX1Q92499 740 aaKnown RBP10.95□□□□□ -0.66
NR1I3-222ENST00000506018 ERCC4Q92889 916 aaPredicted RBP10.95□□□□□ -0.66
NR1I3-222ENST00000506018 SLC35C1Q96A29 364 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 CNOT6LQ96LI5 555 aaKnown RBP10.95□□□□□ -0.66
NR1I3-222ENST00000506018 NT5C1BQ96P26 610 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 BBS2Q9BXC9 721 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 LRRC4Q9HBW1 653 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 PARD6AQ9NPB6 346 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 MAN1B1Q9UKM7 699 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 USP3Q9Y6I4 520 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
NR1I3-222ENST00000506018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 NEDD8-MDP1E9PL57 170 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 XPO1O14980 1071 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 P4HA2O15460 535 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TULP3O75386 442 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 KLF8O95600 359 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TBX18O95935 607 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 ZNF806P0C7X5 589 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 VDRP11473 427 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TGM1P22735 817 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 FMO5P49326 533 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TKTL1P51854 596 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 PMS1P54277 932 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 BST2Q10589 180 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 C10orf76Q5T2E6 689 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 C12orf40Q86WS4 652 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 MIB1Q86YT6 1006 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 ALLCQ8N6M5 410 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 ZNF513Q8N8E2 541 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 NAT16Q8N8M0 369 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TERB1Q8NA31 727 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TXNDC5Q8NBS9 432 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 NELFBQ8WX92 580 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TATDN2Q93075 761 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 ARID3AQ99856 593 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 OLA1Q9NTK5 396 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 DNAJC17Q9NVM6 304 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 MARK1Q9P0L2 795 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 RASAL2Q9UJF2 1139 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 TSPAN16Q9UKR8 245 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.94□□□□□ -0.66
NR1I3-222ENST00000506018 CEP192Q8TEP8 1941 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 ABCA7Q8IZY2 2146 aa10.94□□□□□ -0.66
NR1I3-222ENST00000506018 PMM2O15305 246 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 CACNG3O60359 315 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 ZBED1O96006 694 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 CYBBP04839 570 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 SETSIPP0DME0 302 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 TYRP14679 529 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 MPLP40238 635 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 ATXN1P54253 815 aaKnown RBP10.93□□□□□ -0.66
NR1I3-222ENST00000506018 YWHAGP61981 247 aaKnown RBP eCLIP10.93□□□□□ -0.66
NR1I3-222ENST00000506018 EFEMP1Q12805 493 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 LRMPQ12912 555 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 PAK1Q13153 545 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 STILQ15468 1287 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 PLK5Q496M5 336 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 IL31Q6EBC2 164 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 TPGS1Q6ZTW0 290 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 RASSF3Q86WH2 238 aa10.93□□□□□ -0.66
NR1I3-222ENST00000506018 TMEM25Q86YD3 366 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms