RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PGDP52209 483 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 TAP2Q03519 686 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLFN5Q08AF3 891 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 CCNIQ14094 377 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 E2F2Q14209 437 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 TSTQ16762 297 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 CERCAMQ5T4B2 595 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 CFAP58Q5T655 872 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 TAF2Q6P1X5 1199 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC30A10Q6XR72 485 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 SPATA31D4Q6ZUB0 917 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 GALNT5Q7Z7M9 940 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 TRABD2AQ86V40 505 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 RNF169Q8NCN4 708 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 DNAJB14Q8TBM8 379 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 PHACTR3Q96KR7 559 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 GNRHR2Q96P88 292 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 LRRC37BQ96QE4 947 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 MEGF9Q9H1U4 602 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 SERHL2Q9H4I8 314 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 VPS51Q9UID3 782 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 KCND3Q9UK17 655 aa4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRAPPC13-208ENST00000505553 STX16-NPEPL1H3BU86 382 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 STX16O14662 325 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 SPTLC2O15270 562 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 DHHO43323 396 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 RPP40O75818 363 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 CSF1P09603 554 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 HSPA1AP0DMV8 641 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 HSPA1BP0DMV9 641 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 CHRM3P20309 590 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 EPHA3P29320 983 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 PPIFP30405 207 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 STAT1P42224 750 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 PAFAH1B1P43034 410 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 GATMP50440 423 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZNF134P52741 427 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 RNASE9P60153 205 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 SF3A3Q12874 501 aaKnown RBP eCLIP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 ERV3-1Q14264 604 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 GALNTL6Q49A17 601 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 MFSD4BQ5TF39 518 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 TCTN3Q6NUS6 607 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMEM108Q6UXF1 575 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMTC3Q6ZXV5 915 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 B4GALNT4Q76KP1 1039 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 RASGRP2Q7LDG7 609 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC15A3Q8IY34 581 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 NGEFQ8N5V2 710 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 LSMEM1Q8N8F7 131 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 FSIP1Q8NA03 581 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 MARS2Q96GW9 593 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 CXorf36Q9H7Y0 433 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 GBA2Q9HCG7 927 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 FSCN3Q9NQT6 498 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 ANKEF1Q9NU02 776 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 NDRG4Q9ULP0 352 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 NOL7Q9UMY1 257 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 CNPY2Q9Y2B0 182 aa4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 MRPS17Q9Y2R5 130 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-208ENST00000505553 SPATA31A3Q5VYP0 1347 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 A0A1W2PRQ8 180 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 CCDC78A2IDD5 438 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 B4DLN1 442 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 KLK10O43240 276 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 NARSO43776 548 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 PRSS23O95084 383 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 CER1O95813 267 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC3A2P08195 630 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 CPA1P15085 419 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 ABCD3P28288 659 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 RBL1P28749 1068 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 KRT20P35900 424 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 NPTX2P47972 431 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 MTHFSP49914 203 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 CHN2P52757 468 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 GALNT2Q10471 571 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 EIF4A2Q14240 407 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 CLCA4Q14CN2 919 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 PTCHD3Q3KNS1 767 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 FOXR2Q6PJQ5 311 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMCO3Q6UWJ1 677 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 ANKRD23Q86SG2 305 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 TAX1BP1Q86VP1 789 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 RPAP2Q8IXW5 612 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 FSTL5Q8N475 847 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 ANKRD44Q8N8A2 993 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 NSUN7Q8NE18 718 aaKnown RBP4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 OR52N2Q8NGI0 321 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 SUN3Q8TAQ9 357 aa4.31□□□□□ -1.72
TRAPPC13-208ENST00000505553 KTI12Q96EK9 354 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms