RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ITGB3P05106 788 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 OVGP1Q12889 678 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 MMRN1Q13201 1228 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 PCBP1Q15365 356 aaKnown RBP eCLIP17.6■□□□□ 0.414e-6■■■□□ 14.8
LIN54-204ENST00000505397 MFSD14CQ5VZR4 134 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 NPNTQ6UXI9 565 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 LRRC6Q86X45 466 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 KIRREL3Q8IZU9 778 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 SKA1Q96BD8 255 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 RTP4Q96DX8 246 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 ZIC5Q96T25 663 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 CALN1Q9BXU9 219 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 DENND2DQ9H6A0 471 aaPredicted RBP17.6■□□□□ 0.41
LIN54-204ENST00000505397 USP29Q9HBJ7 922 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 DCTN4Q9UJW0 460 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 C17orf102A2RUQ5 167 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 GPR32O75388 356 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 ALDH1A1P00352 501 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 HMGCRP04035 888 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 C6orf222P0C671 652 aaPredicted RBP17.6■□□□□ 0.41
LIN54-204ENST00000505397 GNAT1P11488 350 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 CTGFP29279 349 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 FAAP100Q0VG06 881 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 TRNP1Q6NT89 227 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 DNAJB3Q8WWF6 145 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 HHIPL1Q96JK4 782 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 TUBB6Q9BUF5 446 aa17.6■□□□□ 0.41
LIN54-204ENST00000505397 C2CD4BA6NLJ0 364 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 NPTXRO95502 500 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 DLDP09622 509 aaKnown RBP17.59■□□□□ 0.41
LIN54-204ENST00000505397 FAM47CQ5HY64 1035 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 NOTUMQ6P988 496 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 SLC27A1Q6PCB7 646 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
LIN54-204ENST00000505397 TMEM130Q8N3G9 435 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 CYP3A43Q9HB55 503 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 PCNTO95613 3336 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 KLF11O14901 512 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 LIN7AO14910 233 aaPredicted RBP17.59■□□□□ 0.41
LIN54-204ENST00000505397 DUSP11O75319 330 aaKnown RBP17.59■□□□□ 0.41
LIN54-204ENST00000505397 GRM5P41594 1212 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 CMPK2Q5EBM0 449 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 SH3PXD2AQ5TCZ1 1133 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 NUDCD1Q96RS6 583 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 CNPY3Q9BT09 278 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 HEY2Q9UBP5 337 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 MTO1Q9Y2Z2 717 aaKnown RBP17.59■□□□□ 0.41
LIN54-204ENST00000505397 C2CD2Q9Y426 696 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 TRIP11Q15643 1979 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 RALGAPA2Q2PPJ7 1873 aa17.59■□□□□ 0.41
LIN54-204ENST00000505397 TREHO43280 583 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 IGHA2P01877 340 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 VDRP11473 427 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 DARSP14868 501 aaKnown RBP17.58■□□□□ 0.41
LIN54-204ENST00000505397 GPD1P21695 349 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 ATICP31939 592 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 CDH6P55285 790 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 CDK16Q00536 496 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 TFDP2Q14188 446 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 FAM102AQ5T9C2 384 aaPredicted RBP17.58■□□□□ 0.41
LIN54-204ENST00000505397 NT5DC4Q86YG4 428 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 RNF157Q96PX1 679 aa17.58■□□□□ 0.41
LIN54-204ENST00000505397 CADM1Q9BY67 442 aaKnown RBP17.58■□□□□ 0.41
LIN54-204ENST00000505397 TRIM6Q9C030 488 aaPredicted RBP17.58■□□□□ 0.41
LIN54-204ENST00000505397 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.58■□□□□ 0.41
LIN54-204ENST00000505397 M0QYV0 167 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 CCDC22O60826 627 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 INHBAP08476 426 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 P4HA1P13674 534 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 IL4RP24394 825 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 ARFIP2P53365 341 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 PURAQ00577 322 aaKnown RBP17.58■□□□□ 0.4
LIN54-204ENST00000505397 RAB6CQ53S08 254 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 C4orf50Q6ZRC1 276 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 ZC3H18Q86VM9 953 aaKnown RBP17.58■□□□□ 0.4
LIN54-204ENST00000505397 KCNV2Q8TDN2 545 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 NAF1Q96HR8 494 aaKnown RBP17.58■□□□□ 0.4
LIN54-204ENST00000505397 FAM111AQ96PZ2 611 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.4
LIN54-204ENST00000505397 RAB6CQ9H0N0 254 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 ALG13Q9NP73 1137 aaKnown RBP17.58■□□□□ 0.4
LIN54-204ENST00000505397 ARL8BQ9NVJ2 186 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 PAK5Q9P286 719 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 TTLL3Q9Y4R7 772 aa17.58■□□□□ 0.4
LIN54-204ENST00000505397 A0A0G2JND7 137 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 PYGBP11216 843 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 MAGEA6P43360 314 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 ADAM17P78536 824 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 FAM91A1Q658Y4 838 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 PRPF39Q86UA1 669 aaKnown RBP17.57■□□□□ 0.4
LIN54-204ENST00000505397 SLC26A11Q86WA9 606 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.57■□□□□ 0.4
LIN54-204ENST00000505397 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 BTBD10Q9BSF8 475 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 ARHGAP39Q9C0H5 1083 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 CDHR5Q9HBB8 845 aa17.57■□□□□ 0.4
LIN54-204ENST00000505397 PLAC1Q9HBJ0 212 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms