RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 USP39Q53GS9 565 aaKnown RBP13.45□□□□□ -0.26
RNF4-206ENST00000504782 PPM1JQ5JR12 505 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 EGFLAMQ63HQ2 1017 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 ARHGAP17Q68EM7 881 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 BHLHA9Q7RTU4 235 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 PIGZQ86VD9 579 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 UBR7Q8N806 425 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 ZNF513Q8N8E2 541 aaPredicted RBP13.45□□□□□ -0.26
RNF4-206ENST00000504782 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 C12orf50Q8NA57 414 aaPredicted RBP13.45□□□□□ -0.26
RNF4-206ENST00000504782 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 HMGB4Q8WW32 186 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 BBS2Q9BXC9 721 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 DNAJC17Q9NVM6 304 aaKnown RBP13.45□□□□□ -0.26
RNF4-206ENST00000504782 DNMT3LQ9UJW3 386 aa13.45□□□□□ -0.26
RNF4-206ENST00000504782 CIZ1Q9ULV3 898 aaPredicted RBP13.45□□□□□ -0.26
RNF4-206ENST00000504782 TCRBV21S2A2A0A5A6 115 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.44□□□□□ -0.26
RNF4-206ENST00000504782 SLC16A3O15427 465 aaKnown RBP13.44□□□□□ -0.26
RNF4-206ENST00000504782 CACNG3O60359 315 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 GABBR2O75899 941 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 RHOBTB1O94844 696 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 CAVIN2O95810 425 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 CISD3P0C7P0 127 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 NUCB2P80303 420 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 PDE4CQ08493 712 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 EFEMP1Q12805 493 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 CUL2Q13617 745 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 BECN1Q14457 450 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 ELF2Q15723 593 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 GOLGA7BQ2TAP0 167 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 RAB41Q5JT25 222 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 EOGTQ5NDL2 527 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 STPG1Q5TH74 334 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 KLHDC10Q6PID8 442 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 ANKRD52Q8NB46 1076 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 UBA3Q8TBC4 463 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 KAT5Q92993 513 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 TIGD1Q96MW7 591 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 TSG101Q99816 390 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 ZSWIM1Q9BR11 485 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 RASAL2Q9UJF2 1139 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 CLEC4EQ9ULY5 219 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 PCDHGA5Q9Y5G8 931 aa13.44□□□□□ -0.26
RNF4-206ENST00000504782 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 A0A1W2PQF6 199 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 WASH3PC4AMC7 463 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 RNF225M0QZC1 329 aaPredicted RBP13.43□□□□□ -0.26
RNF4-206ENST00000504782 STX10O60499 249 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 SMC2O95347 1197 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 GABRG2P18507 467 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 TRIM21P19474 475 aaKnown RBP13.43□□□□□ -0.26
RNF4-206ENST00000504782 KCNA4P22459 653 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 P2RY2P41231 377 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 DHPSP49366 369 aaPredicted RBP13.43□□□□□ -0.26
RNF4-206ENST00000504782 TKTL1P51854 596 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 MAP7D1Q3KQU3 841 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 GRAMD4Q6IC98 578 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 KIAA1211LQ6NV74 962 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 TMEFF1Q8IYR6 380 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 DEFB119Q8N690 84 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 TFAP2BQ92481 460 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 CCDC34Q96HJ3 373 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 FAXDC2Q96IV6 333 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 ULBP1Q9BZM6 244 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 SLC6A17Q9H1V8 727 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 CD248Q9HCU0 757 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 CD93Q9NPY3 652 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 VPS45Q9NRW7 570 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 TMEM74BQ9NUR3 256 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 CLIC5Q9NZA1 410 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 MARK1Q9P0L2 795 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 BCCIPQ9P287 314 aaKnown RBP eCLIP13.43□□□□□ -0.26
RNF4-206ENST00000504782 ARMCX3Q9UH62 379 aaPredicted RBP13.43□□□□□ -0.26
RNF4-206ENST00000504782 LSM7Q9UK45 103 aaKnown RBP13.43□□□□□ -0.26
RNF4-206ENST00000504782 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 RAD54BQ9Y620 910 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 NCOR2Q9Y618 2525 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 SPTBN2O15020 2390 aa13.43□□□□□ -0.26
RNF4-206ENST00000504782 LAMA1P25391 3075 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 BIN1O00499 593 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 RALAP11233 206 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
RNF4-206ENST00000504782 PTGER3P43115 390 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 FMO5P49326 533 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 PSEN1P49768 467 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 LIMK1P53667 647 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 YWHAGP61981 247 aaKnown RBP eCLIP13.42□□□□□ -0.26
RNF4-206ENST00000504782 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 HSF5Q4G112 596 aaPredicted RBP13.42□□□□□ -0.26
RNF4-206ENST00000504782 FYB2Q5VWT5 728 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
RNF4-206ENST00000504782 PGBD3Q8N328 593 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms