RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NCF1P14598 390 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AXLP30530 894 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 BNC1Q01954 994 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ERAP2Q6P179 960 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 MAP4K3Q8IVH8 894 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 REXO1L1PQ8IX06 675 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CDH26Q8IXH8 852 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SLC37A3Q8NCC5 494 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 C11orf65Q8NCR3 313 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SYN2Q92777 582 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SRCIN1Q9C0H9 1055 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 RIBC2Q9H4K1 309 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ACTR3BQ9P1U1 418 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CYB5R1Q9UHQ9 305 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ADGRE2Q9UHX3 823 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 DLGAP4Q9Y2H0 992 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SLC12A7Q9Y666 1083 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 USP19O94966 1318 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 OPLAHO14841 1288 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 FAM107AO95990 144 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 LSP1P33241 339 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 YAP1P46937 504 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CDKN1CP49918 316 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PXDC1Q5TGL8 231 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 KDM7AQ6ZMT4 941 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 RASSF6Q6ZTQ3 369 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CYP2U1Q7Z449 544 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CROCCP2Q86T23 111 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PTCD2Q8WV60 388 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 JADE3Q92613 823 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 GTPBP3Q969Y2 492 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 LRRC2Q9BYS8 371 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 IFNKQ9P0W0 207 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 NOX1Q9Y5S8 564 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 DGKBQ9Y6T7 804 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ZCCHC11Q5TAX3 1644 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PTPN23Q9H3S7 1636 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ADH1CP00326 375 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ITGA9Q13797 1035 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 TMEM132BQ14DG7 1078 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 KANK2Q63ZY3 851 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 MILR1Q7Z6M3 343 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 DTD1Q8TEA8 209 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PTPRN2Q92932 1015 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 INTS12Q96CB8 462 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PKP4Q99569 1192 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 TUBB6Q9BUF5 446 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ZYG11BQ9C0D3 744 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 LIN28AQ9H9Z2 209 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ERAP1Q9NZ08 941 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 GUCA1BQ9UMX6 200 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 RPH3ALQ9UNE2 315 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 RNF24Q9Y225 148 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PCDHA5Q9Y5H7 936 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 KIF24Q5T7B8 1368 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 NUP153P49790 1475 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CYP2D7A0A087X1C5 515 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PGLSO95336 258 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 NADKO95544 446 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 SRCP12931 536 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ITIH1P19827 911 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 RPL9P32969 192 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 MAPK12P53778 367 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CCNA1P78396 465 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PWP1Q13610 501 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 EXOC3L4Q17RC7 722 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PCID2Q5JVF3 399 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 NIPAL1Q6NVV3 410 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 XRRA1Q6P2D8 792 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 LINGO1Q96FE5 620 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ZFRQ96KR1 1074 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 DHRS9Q9BPW9 319 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 KCNS3Q9BQ31 491 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PIDD1Q9HB75 910 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 TRMT13Q9NUP7 481 aaKnown RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 UVRAGQ9P2Y5 699 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 SLC25A17O43808 307 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CDC123O75794 336 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 IL6P05231 212 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 FGFR1P11362 822 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 NCF2P19878 526 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 SOX6P35712 828 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 EPHB1P54762 984 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 SNAP25P60880 206 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 MESDQ14696 234 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 GRIK4Q16099 956 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 KCNA10Q16322 511 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CENPUQ71F23 418 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF677Q86XU0 584 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 TTLQ8NG68 377 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 CLHC1Q8NHS4 586 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF596Q8TC21 504 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 SERPINI1Q99574 410 aa6.43□□□□□ -1.38
CLCN3-204ENST00000504131 KLF6Q99612 283 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-204ENST00000504131 PPP1R14DQ9NXH3 145 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms