RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 NEK8Q86SG6 692 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 TTC30AQ86WT1 665 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 CCDC28AQ8IWP9 274 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 OR2C3Q8N628 320 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 LINC01465Q8N7H1 131 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.61□□□□□ -1.83
ATXN3-208ENST00000504047 C8orf58Q8NAV2 365 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 PMM1Q92871 262 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 C5orf34Q96MH7 638 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.61□□□□□ -1.83
ATXN3-208ENST00000504047 PCDHAC1Q9H158 963 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 CERS4Q9HA82 394 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 GAR1Q9NY12 217 aaKnown RBP3.61□□□□□ -1.83
ATXN3-208ENST00000504047 ASIC5Q9NY37 505 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 ZMYND8Q9ULU4 1186 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-208ENST00000504047 WDR17Q8IZU2 1322 aa3.61□□□□□ -1.83
ATXN3-208ENST00000504047 PODXLO00592 558 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ADAMTS3O15072 1205 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 CA12O43570 354 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 NCK2O43639 380 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 NDST3O95803 873 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 VIPP01282 170 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 IFIT2P09913 472 aaKnown RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 PRR35P0CG20 571 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 EGR1P18146 543 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 EEF1GP26641 437 aaKnown RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 MST1P26927 711 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 HTR7P34969 479 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 DEUP1Q05D60 604 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 HDAC1Q13547 482 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ATP1A4Q13733 1029 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ZNF268Q14587 947 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 MFSD13AQ14CX5 517 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 MAPKAPK3Q16644 382 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 SLC5A9Q2M3M2 681 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 CEP78Q5JTW2 689 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ARL6IP4Q66PJ3 421 aaKnown RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ABLIM2Q6H8Q1 611 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 SLC18B1Q6NT16 456 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ZNF813Q6ZN06 617 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ZNF66Q6ZN08 573 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 YTHDF3Q7Z739 585 aaKnown RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 SRLQ86TD4 932 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 FAM186BQ8IYM0 893 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 GALNT16Q8N428 558 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 EDC3Q96F86 508 aaKnown RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 HIC2Q96JB3 615 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 EIF3CQ99613 913 aaKnown RBP3.6□□□□□ -1.83
ATXN3-208ENST00000504047 FAM118BQ9BPY3 351 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 SLC29A3Q9BZD2 475 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 NLRC4Q9NPP4 1024 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 TM7SF3Q9NS93 570 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 GJB4Q9NTQ9 266 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 RGL1Q9NZL6 768 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ASAP1Q9ULH1 1129 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 FZD4Q9ULV1 537 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 ZNF804BA4D1E1 1349 aa3.6□□□□□ -1.83
ATXN3-208ENST00000504047 PCSK5Q92824 1860 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 FAM234BA2RU67 622 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 CGB1A6NKQ9 187 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 TTC34A8MYJ7 566 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 CLIC1O00299 241 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 FYB1O15117 783 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 SLC3A2P08195 630 aaKnown RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 SRGAP2BP0DMP2 458 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 TMIGD3P0DMS9 266 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 ARP10275 920 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 DRD1P21728 446 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 MMP8P22894 467 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 GABRB3P28472 473 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 GSTM5P46439 218 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 JAK3P52333 1124 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 GPC5P78333 572 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 NSUN2Q08J23 767 aaKnown RBP eCLIP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 BFSP2Q13515 415 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 DNASE1L3Q13609 305 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 PFKFB3Q16875 520 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 SLC35G1Q2M3R5 365 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 P3H1Q32P28 736 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 MTX3Q5HYI7 312 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 GRHL2Q6ISB3 625 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 RANBP10Q6VN20 620 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 NOL8Q76FK4 1167 aaKnown RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 SKAP1Q86WV1 359 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 CNGA4Q8IV77 575 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 CCDC146Q8IYE0 955 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 GLIS1Q8NBF1 620 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 OSR1Q8TAX0 266 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 DEPTORQ8TB45 409 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 OVCA2Q8WZ82 227 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 CUL5Q93034 780 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 WDR24Q96S15 920 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 ELAC2Q9BQ52 826 aaKnown RBP3.59□□□□□ -1.83
ATXN3-208ENST00000504047 NUDT22Q9BRQ3 303 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 EFHD1Q9BUP0 239 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 ADGRE3Q9BY15 652 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 AS3MTQ9HBK9 375 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 ARFGAP3Q9NP61 516 aa3.59□□□□□ -1.83
ATXN3-208ENST00000504047 NECTIN3Q9NQS3 549 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms