RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MFHAS1Q9Y4C4 1052 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PCDHA13Q9Y5I0 950 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TRBV5-4A0A0C4DH59 114 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SMIM22K7EJ46 135 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ARNTLO00327 626 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KPNA4O00629 521 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ENC1O14682 589 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CAPN9O14815 690 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 USP2O75604 605 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TGDSO95455 350 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 EPOP01588 193 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CYP1A2P05177 515 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HOXA11P31270 313 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RFC5P40937 340 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ABL2P42684 1182 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PTENP60484 403 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 BNC1Q01954 994 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 DSG1Q02413 1049 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KLHL30Q0D2K2 578 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KYNUQ16719 465 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF829Q3KNS6 432 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CEP55Q53EZ4 464 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RARS2Q5T160 578 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 FAM171BQ6P995 826 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 AGMOQ6ZNB7 445 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HAUS6Q7Z4H7 955 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 C2CD5Q86YS7 1000 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PDPRQ8NCN5 879 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RIN3Q8TB24 985 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 P2RX5Q93086 422 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ERP27Q96DN0 273 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NRBF2Q96F24 287 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KRT12Q99456 494 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HGH1Q9BTY7 390 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 UBE2OQ9C0C9 1292 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 METTL5Q9NRN9 209 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RBM12Q9NTZ6 932 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CCNL1Q9UK58 526 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SLC12A7Q9Y666 1083 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TCAF2A6NFQ2 919 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 H3BNC9 293 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CNOT3O75175 753 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TRMUO75648 421 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ABCB1P08183 1280 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CYP2C9P11712 490 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CHN1P15882 459 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RPL17P18621 184 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 IREB2P48200 963 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 GUCY2FP51841 1108 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SLC9A4Q6AI14 798 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KCNK18Q7Z418 384 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CHPFQ8IZ52 775 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PYROXD1Q8WU10 500 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CFAP36Q96G28 342 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CEP19Q96LK0 163 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MRPL46Q9H2W6 279 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MCM9Q9NXL9 1143 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 C6orf203Q9P0P8 240 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SLC24A2Q9UI40 661 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ZMYM5Q9UJ78 669 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PACSIN2Q9UNF0 486 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TTC34A8MYJ7 566 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NTRK1P04629 796 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PDHA1P08559 390 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 UBTFL6P0CB48 400 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MLNP12872 115 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ITIH2P19823 946 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MAP3K8P41279 467 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RAP1GDS1P52306 607 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 BLVRAP53004 296 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ERVK-9P63128 1117 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 OCA2Q04671 838 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HNRNPDQ14103 355 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RTN1Q16799 776 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CXorf57Q6NSI4 855 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RASSF3Q86WH2 238 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ERI1Q8IV48 349 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RBM15BQ8NDT2 890 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF420Q8TAQ5 688 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NAT14Q8WUY8 206 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NELFBQ8WX92 580 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ECHDC3Q96DC8 303 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TRIM11Q96F44 468 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 COX4I2Q96KJ9 171 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SERPINI1Q99574 410 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CHP1Q99653 195 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MYD88Q99836 296 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 IFT122Q9HBG6 1241 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PARVGQ9HBI0 331 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 EHD2Q9NZN4 543 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF70Q9UC06 446 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PRELID1Q9Y255 219 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ATP11BQ9Y2G3 1177 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NEUROG3Q9Y4Z2 214 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CLIC4Q9Y696 253 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 OTOGLQ3ZCN5 2332 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CCDC194A0A1B0GVG4 234 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 FADS2P1A8MWK0 482 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 E9PBE3 544 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 FAM86B1E9PN63 330 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms