RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 TRMT5Q32P41 509 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 C1orf186Q6ZWK4 172 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 RXFP2Q8WXD0 754 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 CNBD2Q96M20 576 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 AVENQ9NQS1 362 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 GPATCH2LQ9NWQ4 482 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 CAPN15O75808 1086 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 EGFRP00533 1210 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 RARAP10276 462 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 WASHC2DQ5SRD0 308 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 UGT3A1Q6NUS8 523 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 KCNK18Q7Z418 384 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 SEPT3Q9UH03 358 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 IFT172Q9UG01 1749 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 SKAP2O75563 359 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 CPA3P15088 417 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 VPS37AQ8NEZ2 397 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 GPR63Q9BZJ6 419 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 CFAP99D6REC4 459 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 ETFBP38117 255 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 BTKQ06187 659 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 SPDYE7PQ495Y7 208 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 ZRANB3Q5FWF4 1079 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 TIGD7Q6NT04 549 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 ANKS3Q6ZW76 656 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 ARHGEF19Q8IW93 802 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 SPATA17Q96L03 361 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 ECSITQ9BQ95 431 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 STARD7Q9NQZ5 370 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 APPL1Q9UKG1 709 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 UBIAD1Q9Y5Z9 338 aa16.65■□□□□ 0.26
HMGXB3-202ENST00000503427 OLFML2BQ68BL8 750 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TLK2Q86UE8 772 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 STX19Q8N4C7 294 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 EMC1Q8N766 993 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TMEM161AQ9NX61 479 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 CYP39A1Q9NYL5 469 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 KANSL1LA0AUZ9 987 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 PLA2G6O60733 806 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TNFRSF8P28908 595 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 GTF2H3Q13889 308 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 SNX31Q8N9S9 440 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF606Q8WXB4 792 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TUBGCP3Q96CW5 907 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 SOX11P35716 441 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 MFSD10Q14728 455 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 PKN3Q6P5Z2 889 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 STRA8Q7Z7C7 330 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 HAS1Q92839 578 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 DRG1Q9Y295 367 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 MGAT5Q09328 741 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 ACVR2BQ13705 512 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 HORMAD1Q86X24 394 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TBC1D19Q8N5T2 526 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 VPS50Q96JG6 964 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 TMEM134Q9H6X4 195 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 NINJ2Q9NZG7 142 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 LZTS1Q9Y250 596 aa16.64■□□□□ 0.25
HMGXB3-202ENST00000503427 SYNDIG1LA6NDD5 238 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 STX7O15400 261 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 PRKCIP41743 596 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 ARHGEF7Q14155 803 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 ARHGAP15Q53QZ3 475 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 P3H2Q8IVL5 708 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 TBCBQ99426 244 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 PORCNQ9H237 461 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 IARS2Q9NSE4 1012 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 ACOT9Q9Y305 439 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 LRG1P02750 347 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 IRF1P10914 325 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 TMPRSS6Q8IU80 811 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 INPP5DQ92835 1189 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 TRMT6Q9UJA5 497 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 NFASCO94856 1347 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 UBA1P22314 1058 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 AVPR1AP37288 418 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 CCDC85BQ15834 202 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 DDX53Q86TM3 631 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 SNTG2Q9NY99 539 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 AP4S1Q9Y587 144 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 PSMC3P17980 439 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 TFE3P19532 575 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 MRPS15P82914 257 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 TTC30AQ86WT1 665 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 TSEN2Q8NCE0 465 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 DNAJB3Q8WWF6 145 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 FBXO32Q969P5 355 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 KLHL4Q9C0H6 718 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 NCKIPSDQ9NZQ3 722 aa16.63■□□□□ 0.25
HMGXB3-202ENST00000503427 GOLGA8TH3BQL2 631 aa16.62■□□□□ 0.25
HMGXB3-202ENST00000503427 RBP1P09455 135 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms