RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ELOVL4Q9GZR5 314 aa7.68□□□□□ -1.18
PDGFC-203ENST00000502773 SMYD3Q9H7B4 428 aa7.68□□□□□ -1.18
PDGFC-203ENST00000502773 EIF2B3Q9NR50 452 aaKnown RBP7.68□□□□□ -1.18
PDGFC-203ENST00000502773 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDGFC-203ENST00000502773 BFARQ9NZS9 450 aa7.68□□□□□ -1.18
PDGFC-203ENST00000502773 IPO11Q9UI26 975 aaKnown RBP7.68□□□□□ -1.18
PDGFC-203ENST00000502773 CDH9Q9ULB4 789 aa7.68□□□□□ -1.18
PDGFC-203ENST00000502773 SQORQ9Y6N5 450 aa7.68□□□□□ -1.18
PDGFC-203ENST00000502773 KBTBD13C9JR72 458 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 KCNN4O15554 427 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 H2AFYO75367 372 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 KRT10P13645 584 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 FLT3P36888 993 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 HCAR3P49019 387 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 RPS6KA3P51812 740 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SLC45A4Q5BKX6 768 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TNFAIP8L3Q5GJ75 292 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ARHGAP22Q7Z5H3 698 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 PIGWQ7Z7B1 504 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 LCA5Q86VQ0 697 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 UHMK1Q8TAS1 419 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SNRNP27Q8WVK2 155 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 PRCCQ92733 491 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 C9orf72Q96LT7 481 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 OXCT2Q9BYC2 517 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 HAPLN2Q9GZV7 340 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DHX35Q9H5Z1 703 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 RXFP1Q9HBX9 757 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TXNRD2Q9NNW7 524 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ZC3H7BQ9UGR2 993 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TCRBV5S1A1TA0A578 114 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CCDC189A1A4V9 331 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ZBTB42B2RXF5 422 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TCP11X1B4DZS4 312 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 GCATO75600 419 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 APOA4P06727 396 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 THP07101 528 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 MATKP42679 507 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 YWHAZP63104 245 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SLC25A11Q02978 314 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CDK18Q07002 472 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DMPKQ09013 629 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TAF11Q15544 211 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TRADDQ15628 312 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TSNAXIP1Q2TAA8 658 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ANKRD20A8PQ5CZ79 823 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CCDC80Q76M96 950 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 MAGEC3Q8TD91 643 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TFAP2BQ92481 460 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CPB2Q96IY4 423 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 LRRC37BQ96QE4 947 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DDX23Q9BUQ8 820 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CNGB3Q9NQW8 809 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 PAPOLBQ9NRJ5 636 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 RAB6BQ9NRW1 208 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 FNIP2Q9P278 1114 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 KANSL3Q9P2N6 904 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SIX4Q9UIU6 781 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 MBLAC1A4D2B0 266 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 B4GALT5O43286 388 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CCDC22O60826 627 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DUSP11O75319 330 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 IVDP26440 423 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 IFNAR2P48551 515 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SEC24CP53992 1094 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DEUP1Q05D60 604 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 MTFR1Q15390 333 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 UGP2Q16851 508 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 GRAMD4Q6IC98 578 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 AADACL2Q6P093 401 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ADGRD1Q6QNK2 874 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TRABD2AQ86V40 505 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DCP1BQ8IZD4 617 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 UBA3Q8TBC4 463 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 URGCPQ8TCY9 931 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 COPS5Q92905 334 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 RNF34Q969K3 372 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 KLHL29Q96CT2 875 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CPXM1Q96SM3 734 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DUSP16Q9BY84 665 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SAR1AQ9NR31 198 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SETD4Q9NVD3 440 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SNTG2Q9NY99 539 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CHORDC1Q9UHD1 332 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 AP4E1Q9UPM8 1137 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SDR42E2A6NKP2 422 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 E7ESA3 106 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SNX3O60493 162 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 LPXNO60711 386 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ATP6V1G1O75348 118 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 CELF2O95319 508 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 PAMP19021 973 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 LRPAP1P30533 357 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 RPL22P35268 128 aaKnown RBP7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SULT1E1P49888 294 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 DPYSL2Q16555 572 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SLC25A52Q3SY17 297 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SCARA3Q6AZY7 606 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 ACOT1Q86TX2 421 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SMC1BQ8NDV3 1235 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms