RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 BTBD19C9JJ37 291 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 KRT37O76014 449 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 RECQL4O94761 1208 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 CD4P01730 458 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 DHRS4L1P0CG22 281 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 PYGBP11216 843 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 GNL1P36915 607 aaPredicted RBP17.19■□□□□ 0.34
VCAN-204ENST00000502527 ACADSBP45954 432 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 GTF2A2P52657 109 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 GRB14Q14449 540 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 E2F5Q15329 346 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 PARP6Q2NL67 630 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 FBXO47Q5MNV8 452 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 SH2D5Q6ZV89 423 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 GPR142Q7Z601 462 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 PRPF39Q86UA1 669 aaKnown RBP17.19■□□□□ 0.34
VCAN-204ENST00000502527 CTAGE3PQ8IX95 158 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 VPS52Q8N1B4 723 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 PPM1NQ8N819 430 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 INPP5DQ92835 1189 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 APBB2Q92870 758 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 TBC1D31Q96DN5 1066 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 TACO1Q9BSH4 297 aaKnown RBP17.19■□□□□ 0.34
VCAN-204ENST00000502527 TINF2Q9BSI4 451 aa17.19■□□□□ 0.34
VCAN-204ENST00000502527 NRCAMQ92823 1304 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 UNCXA6NJT0 531 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 FAM155BO75949 473 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 MAP3K6O95382 1288 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 SNRPAP09012 282 aaKnown RBP17.18■□□□□ 0.34
VCAN-204ENST00000502527 DARSP14868 501 aaKnown RBP17.18■□□□□ 0.34
VCAN-204ENST00000502527 TFE3P19532 575 aaPredicted RBP17.18■□□□□ 0.34
VCAN-204ENST00000502527 PRKCHP24723 683 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 ADORA2BP29275 332 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 ETV4P43268 484 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 RPL34P49207 117 aaKnown RBP17.18■□□□□ 0.34
VCAN-204ENST00000502527 RASSF2P50749 326 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 NLRP9Q7RTR0 991 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 MS4A4AQ96JQ5 239 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 ZNF560Q96MR9 790 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 OSMRQ99650 979 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 LPIN3Q9BQK8 851 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 SNX25Q9H3E2 840 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 C12orf65Q9H3J6 166 aaKnown RBP17.18■□□□□ 0.34
VCAN-204ENST00000502527 NXF3Q9H4D5 531 aaKnown RBP17.18■□□□□ 0.34
VCAN-204ENST00000502527 CDHR5Q9HBB8 845 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 AP4E1Q9UPM8 1137 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 SRCAPQ6ZRS2 3230 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 PLXNB2O15031 1838 aa17.18■□□□□ 0.34
VCAN-204ENST00000502527 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 PIRO00625 290 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 C1QAP02745 245 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 PDGFRBP09619 1106 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 LCP1P13796 627 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 CCDC130P13994 396 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TPSB2P20231 275 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 AXLP30530 894 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 PNPLA4P41247 253 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 GBE1Q04446 702 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TPSAB1Q15661 275 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 CCL15Q16663 113 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 CLEC4CQ8WTT0 213 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 KBTBD7Q8WVZ9 684 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 FAM111AQ96PZ2 611 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TSSK1BQ9BXA7 367 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TRIM55Q9BYV6 548 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 GTF2IRD1Q9UHL9 959 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 SMIM35A0A1B0GVV1 85 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 KPNA7A9QM74 516 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TRIM49D1C9J1S8 452 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 XPOTO43592 962 aaKnown RBP17.17■□□□□ 0.34
VCAN-204ENST00000502527 SMIM10L2AP0DMW4 78 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 SMIM10L2BP0DMW5 78 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 CCND1P24385 295 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TARSP26639 723 aaKnown RBP17.17■□□□□ 0.34
VCAN-204ENST00000502527 HSFY1Q96LI6 401 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 QKIQ96PU8 341 aaKnown RBP eCLIP17.17■□□□□ 0.34
VCAN-204ENST00000502527 CSPG4P5Q96PW8 444 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TMEM237Q96Q45 408 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 TSPAN18Q96SJ8 248 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 IQCGQ9H095 443 aaKnown RBP17.17■□□□□ 0.34
VCAN-204ENST00000502527 GDAP2Q9NXN4 497 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.17■□□□□ 0.34
VCAN-204ENST00000502527 ZFP69BQ9UJL9 534 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 HAO1Q9UJM8 370 aa17.17■□□□□ 0.34
VCAN-204ENST00000502527 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.17■□□□□ 0.34
VCAN-204ENST00000502527 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 SLC15A5A6NIM6 579 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 COPEO14579 308 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 CAPN15O75808 1086 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 APOEP02649 317 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 CYP2C9P11712 490 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 NEFHP12036 1026 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 AKAP5P24588 427 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 MAGEA3P43357 314 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 SLC10A2Q12908 348 aaPredicted RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 FAM182AQ5T1J6 154 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 ANKRD23Q86SG2 305 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 AGAP11Q8TF27 550 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms