RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 GLRA4Q5JXX5 417 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 EMC10Q5UCC4 262 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 HOOK3Q86VS8 718 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FAM129CQ86XR2 697 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CCDC13Q8IYE1 715 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 TRIML2Q8N7C3 387 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 POC5Q8NA72 575 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 SLC35B4Q969S0 331 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 NMD3Q96D46 503 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 C16orf92Q96LL3 132 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FDXACB1Q9BRP7 624 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 PUS3Q9BZE2 481 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 CLSTN2Q9H4D0 955 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 MAGEE1Q9HCI5 957 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PDE11AQ9HCR9 933 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 IL20Q9NYY1 176 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PI4KBQ9UBF8 816 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 MID2Q9UJV3 735 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 B3GALT1Q9Y5Z6 326 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 SLC4A4Q9Y6R1 1079 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FAM237BA0A1B0GVD1 139 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PYCARD-AS1I3L0S3 204 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 MAGEB3O15480 346 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 SPINT1O43278 529 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 TADA2AO75478 443 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 F11P03951 625 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 IL1R1P14778 569 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 NPPBP16860 134 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CCNA2P20248 432 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PSMC2P35998 433 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 PITPNBP48739 271 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ID3Q02535 119 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 RING1Q06587 406 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 SPIRE1Q08AE8 756 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CTBP1Q13363 440 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 LSAMPQ13449 338 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 HFEQ30201 348 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 GLE1Q53GS7 698 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 CATSPEREQ5SY80 951 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 E4F1Q66K89 784 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 OTUD7BQ6GQQ9 843 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ETFRF1Q6IPR1 90 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CHST9Q7L1S5 443 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 MEIOBQ8N635 442 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 DCBLD1Q8N8Z6 715 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FBXO18Q8NFZ0 1043 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PIP4K2CQ8TBX8 421 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 WHAMMQ8TF30 809 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PPP1R13LQ8WUF5 828 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 BCL7CQ8WUZ0 217 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 RAPGEF5Q92565 580 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 THRSPQ92748 146 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 GIMAP5Q96F15 307 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ABHD17AQ96GS6 310 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 LENG8Q96PV6 779 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 RUFY1Q96T51 708 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 EIF2AQ9BY44 585 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 NELFAQ9H3P2 528 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ATP13A1Q9HD20 1204 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 KCNH7Q9NS40 1196 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 SLC35D1Q9NTN3 355 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PCDHGC4Q9Y5F7 938 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CAPN7Q9Y6W3 813 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 IGSF1Q8N6C5 1336 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TRIM43BA6NCK2 446 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 BTBD18B2RXH4 712 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 IFIT3O14879 490 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 POLR3GO15318 223 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 VEGFDO43915 354 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CCNDBP1O95273 360 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PENKP01210 267 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 MMP2P08253 660 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 GSTM1P09488 218 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PRKCHP24723 683 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TM4SF1P30408 202 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 GRK5P34947 590 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PSMB10P40306 273 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CTSKP43235 329 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 NRIP1P48552 1158 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 NPY4RP50391 375 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 ARFIP2P53365 341 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CDH8P55286 799 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 MRPS5P82675 430 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 RUNX1T1Q06455 604 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 BNIP1Q12981 228 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CCDC152Q4G0S7 254 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SLC39A12Q504Y0 691 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 KRT80Q6KB66 452 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 DNAAF5Q86Y56 855 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CCDC28AQ8IWP9 274 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SLC15A4Q8N697 577 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 GALNT6Q8NCL4 622 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 OR56A3Q8NH54 315 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 OR14C36Q8NHC7 312 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TEKT4Q8WW24 435 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SLC22A18Q96BI1 424 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TRIM43Q96BQ3 446 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 GRAMD1AQ96CP6 724 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms