RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CAPN11Q9UMQ6 739 aa2.94□□□□□ -1.94
SMAD1-203ENST00000502342 SCAF8Q9UPN6 1271 aaKnown RBP2.94□□□□□ -1.94
SMAD1-203ENST00000502342 BTBD3Q9Y2F9 522 aa2.94□□□□□ -1.94
SMAD1-203ENST00000502342 CEP83Q9Y592 693 aa2.94□□□□□ -1.94
SMAD1-203ENST00000502342 PCDHB2Q9Y5E7 798 aa2.94□□□□□ -1.94
SMAD1-203ENST00000502342 ZNF521Q96K83 1311 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 A0A087WZ62 844 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 CYP2D7A0A087X1C5 515 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 ADAM10O14672 748 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 ZSCAN9O15535 394 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 PRAMEF2O60811 474 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 CAND2O75155 1236 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 WDR47O94967 919 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 NDST3O95803 873 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 KRT18P05783 430 aaKnown RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 TMIGD3P0DMS9 266 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 CYP19A1P11511 503 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 TRIM27P14373 513 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 DRD1P21728 446 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 FGFR2P21802 821 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 ATP5F1P24539 256 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 HOXD9P28356 352 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 PLCD1P51178 756 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 COPAP53621 1224 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 GPS1Q13098 491 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 SLC14A1Q13336 389 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 BFSP2Q13515 415 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 HLTFQ14527 1009 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 LARS2Q15031 903 aaKnown RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 SEC23BQ15437 767 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 P3H1Q32P28 736 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 ARL13BQ3SXY8 428 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 Q4G0T1 1027 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 FAM209BQ5JX69 171 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 EPHA10Q5JZY3 1008 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 MORN5Q5VZ52 161 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 RAP1GAP2Q684P5 730 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 C11orf87Q6NUJ2 197 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 KRT28Q7Z3Y7 464 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 PNPLA1Q8N8W4 532 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 PJA1Q8NG27 643 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 MBD3L2Q8NHZ7 208 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 GRAMD1AQ96CP6 724 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 EDC3Q96F86 508 aaKnown RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 SNX27Q96L92 541 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 VPS45Q9NRW7 570 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 ZNF70Q9UC06 446 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 VPS51Q9UID3 782 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 MAN2B2Q9Y2E5 1009 aa2.93□□□□□ -1.94
SMAD1-203ENST00000502342 HEMK1Q9Y5R4 338 aaPredicted RBP2.93□□□□□ -1.94
SMAD1-203ENST00000502342 COL15A1P39059 1388 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 H3BNC9 293 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 INO80B-WBP1J3KQ70 363 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 NCK2O43639 380 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 SRGAP2BP0DMP2 458 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 HARSP12081 509 aaKnown RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 GALNSP34059 522 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 HTR7P34969 479 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 CASP5P51878 434 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 DGKQP52824 942 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 YPEL5P62699 121 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 GPC5P78333 572 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 ZNF91Q05481 1191 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 MTAPQ13126 283 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 TRIP6Q15654 476 aaKnown RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 LONRF1Q17RB8 773 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 ARHGAP15Q53QZ3 475 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 PAPD7Q5XG87 772 aaKnown RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 IL31Q6EBC2 164 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 HIBCHQ6NVY1 386 aaPredicted RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 C11orf96Q7Z7L8 435 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 DPP9Q86TI2 863 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 GLCCI1Q86VQ1 547 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 TTC30AQ86WT1 665 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 SKAP1Q86WV1 359 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 NANOGP1Q8N7R0 232 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 RNF152Q8N8N0 203 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 SUN3Q8TAQ9 357 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 PNISRQ8TF01 805 aaKnown RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 SCARB1Q8WTV0 552 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 MAP4K1Q92918 833 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 ZNF566Q969W8 418 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 EIF3CQ99613 913 aaKnown RBP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.92□□□□□ -1.94
SMAD1-203ENST00000502342 PCDHAC1Q9H158 963 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 VPS16Q9H269 839 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 STARD7Q9NQZ5 370 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 TMEM184CQ9NVA4 438 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 ARL8BQ9NVJ2 186 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 ELOVL5Q9NYP7 299 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 MYO1AQ9UBC5 1043 aa2.92□□□□□ -1.94
SMAD1-203ENST00000502342 C16orf96A6NNT2 1141 aa2.91□□□□□ -1.94
SMAD1-203ENST00000502342 CLCA1A8K7I4 914 aa2.91□□□□□ -1.94
SMAD1-203ENST00000502342 PPEF2O14830 753 aa2.91□□□□□ -1.94
SMAD1-203ENST00000502342 PRC1O43663 620 aa2.91□□□□□ -1.94
SMAD1-203ENST00000502342 BCAR3O75815 825 aa2.91□□□□□ -1.94
SMAD1-203ENST00000502342 SLC3A2P08195 630 aaKnown RBP2.91□□□□□ -1.94
SMAD1-203ENST00000502342 ARP10275 920 aa2.91□□□□□ -1.94
SMAD1-203ENST00000502342 TSHRP16473 764 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms