RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FLRT2O43155 660 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 CACNG3O60359 315 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 TLR5O60602 858 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 C1QL1O75973 258 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 ACADMP11310 421 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 TNNI1P19237 187 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SLC5A3P53794 718 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 CDH8P55286 799 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 ORC1Q13415 861 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 STARD3Q14849 445 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SF3A1Q15459 793 aaKnown RBP9.65□□□□□ -0.86
CCDC171-209ENST00000498725 RRAGBQ5VZM2 374 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 LAYNQ6UX15 382 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SCARA5Q6ZMJ2 495 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SCUBE3Q8IX30 993 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 GALNT15Q8N3T1 639 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 BAHD1Q8TBE0 780 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-209ENST00000498725 DNASE2BQ8WZ79 361 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 HPS3Q969F9 1004 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 DNAJC19Q96DA6 116 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SIPA1Q96FS4 1042 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 CDC6Q99741 560 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 MKRN2Q9H000 416 aaKnown RBP9.65□□□□□ -0.86
CCDC171-209ENST00000498725 PANK4Q9NVE7 773 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 WDR35Q9P2L0 1181 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.86
CCDC171-209ENST00000498725 NUDT5Q9UKK9 219 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 SLCO1B1Q9Y6L6 691 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 ATP8B3O60423 1300 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 AP1G2O75843 785 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 IL12RB1P42701 662 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 TPMTP51580 245 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 MYL6P60660 151 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 SEMG2Q02383 582 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 SURF1Q15526 300 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 TMPRSS6Q8IU80 811 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
CCDC171-209ENST00000498725 OVCA2Q8WZ82 227 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 CCDC127Q96BQ5 260 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
CCDC171-209ENST00000498725 SMYD3Q9H7B4 428 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 ITM2CQ9NQX7 267 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 HSPBP1Q9NZL4 362 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 USP36Q9P275 1121 aaKnown RBP9.64□□□□□ -0.87
CCDC171-209ENST00000498725 DKK4Q9UBT3 224 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 CCDC39Q9UFE4 941 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 RAI2Q9Y5P3 530 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 GOLGA4Q13439 2230 aaKnown RBP9.64□□□□□ -0.87
CCDC171-209ENST00000498725 ACACAQ13085 2346 aa9.64□□□□□ -0.87
CCDC171-209ENST00000498725 CKAP5Q14008 2032 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 A0A087WV48 116 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CYSRT1A8MQ03 144 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 METTL12A8MUP2 240 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CBX4O00257 560 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 GFRA2O00451 464 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CLIC2O15247 247 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 SYNCRIPO60506 623 aaKnown RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 PHACTR2O75167 634 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 TACC1O75410 805 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 BEST1O76090 585 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 HMBSP08397 361 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CISD3P0C7P0 127 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF883P0CG24 379 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 HLA-EP13747 358 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CCDC130P13994 396 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 PLA2G2AP14555 144 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 EIF2S3P41091 472 aaKnown RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CYP2J2P51589 502 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 MAP3K7CLP57077 242 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 TRPC3Q13507 836 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 NUMA1Q14980 2115 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 SUZ12Q15022 739 aaKnown RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 KIF19Q2TAC6 998 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 IL27RAQ6UWB1 636 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 LRRC69Q6ZNQ3 347 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 PAQR9Q6ZVX9 377 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF605Q86T29 641 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 ACOT1Q86TX2 421 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 WDR49Q8IV35 697 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 PRCCQ92733 491 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CLIC6Q96NY7 704 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 KIF2CQ99661 725 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 C6orf106Q9H6K1 298 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 TLR8Q9NR97 1041 aaKnown RBP9.63□□□□□ -0.87
CCDC171-209ENST00000498725 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CLIC4Q9Y696 253 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 AK5Q9Y6K8 562 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 APC2O95996 2303 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 CELSR3Q9NYQ7 3312 aa9.63□□□□□ -0.87
CCDC171-209ENST00000498725 ATXN7O15265 892 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 CYP26A1O43174 497 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 TNFSF14O43557 240 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms