RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ACDQ96AP0 544 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 RMDN1Q96DB5 314 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 CNOT6LQ96LI5 555 aaKnown RBP16.91■□□□□ 0.3
NR1H3-227ENST00000498548 CRACR2AQ9BSW2 395 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 CLSTN2Q9H4D0 955 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 PLK2Q9NYY3 685 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 CLIC5Q9NZA1 410 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 USP18Q9UMW8 372 aa16.91■□□□□ 0.3
NR1H3-227ENST00000498548 SDK1Q7Z5N4 2213 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 SLC12A8A0AV02 714 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 TBC1D3BA6NDS4 549 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 SGK1O00141 431 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 DCLK1O15075 740 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 RPP40O75818 363 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 GABBR2O75899 941 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 APBB3O95704 486 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 PAEPP09466 180 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 GRIA2P42262 883 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 MRPS21P82921 87 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 PKDCCQ504Y2 493 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 PM20D1Q6GTS8 502 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 GJB7Q6PEY0 223 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 LCLAT1Q6UWP7 414 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 TMEM92Q6UXU6 159 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 Q6ZNB5 142 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 RSRC2Q7L4I2 434 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 TADA2BQ86TJ2 420 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 KBTBD6Q86V97 674 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 ARHGAP18Q8N392 663 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 TXNDC5Q8NBS9 432 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 GAB3Q8WWW8 586 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 EDEM1Q92611 657 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 P2RY11Q96G91 374 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 BBS2Q9BXC9 721 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 TPSD1Q9BZJ3 242 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 UBE2TQ9NPD8 197 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 DNAJC17Q9NVM6 304 aaKnown RBP16.9■□□□□ 0.3
NR1H3-227ENST00000498548 DEC1Q9P2X7 70 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 MMP17Q9ULZ9 603 aa16.9■□□□□ 0.3
NR1H3-227ENST00000498548 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-227ENST00000498548 M0QYV0 167 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-227ENST00000498548 KRT5P13647 590 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 TYRP14679 529 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 SLC9A1P19634 815 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 CORO1AP31146 461 aaKnown RBP16.89■□□□□ 0.29
NR1H3-227ENST00000498548 WASP42768 502 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 KIR2DL1P43626 348 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-227ENST00000498548 APBA1Q02410 837 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 CCDC6Q16204 474 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 CNGA2Q16280 664 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 PMF1Q6P1K2 205 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 IRF2BP1Q8IU81 584 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 ZNF276Q8N554 614 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 IL17RCQ8NAC3 791 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 TSTD1Q8NFU3 115 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 ERLEC1Q96DZ1 483 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
NR1H3-227ENST00000498548 MARCH2Q9P0N8 246 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 SFMBT1Q9UHJ3 866 aa16.89■□□□□ 0.29
NR1H3-227ENST00000498548 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.89■□□□□ 0.29
NR1H3-227ENST00000498548 CCDC163A0A0D9SF12 145 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 YJEFN3A6XGL0 299 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 E7ENQ6 273 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 RETP07949 1114 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 SETSIPP0DME0 302 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 COG7P83436 770 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 CRY1Q16526 586 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-227ENST00000498548 RSPO4Q2I0M5 234 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-227ENST00000498548 C10orf76Q5T2E6 689 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 BSPRYQ5W0U4 402 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 ANO7Q6IWH7 933 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 CACNA2D4Q7Z3S7 1137 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 DENND1CQ8IV53 801 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 CCDC26Q8TAB7 109 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 CLEC4CQ8WTT0 213 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 SLC35F5Q8WV83 523 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 KCTD13Q8WZ19 329 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 XPO6Q96QU8 1125 aaKnown RBP16.88■□□□□ 0.29
NR1H3-227ENST00000498548 CDK5RAP1Q96SZ6 601 aaKnown RBP16.88■□□□□ 0.29
NR1H3-227ENST00000498548 WDR35Q9P2L0 1181 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 AGO1Q9UL18 857 aaKnown RBP16.88■□□□□ 0.29
NR1H3-227ENST00000498548 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.88■□□□□ 0.29
NR1H3-227ENST00000498548 SPAG17Q6Q759 2223 aa16.88■□□□□ 0.29
NR1H3-227ENST00000498548 ADAM23O75077 832 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 MTIF2P46199 727 aaKnown RBP16.87■□□□□ 0.29
NR1H3-227ENST00000498548 ZNF132P52740 706 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 DAOAP59103 153 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 GCNT1Q02742 428 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 ARHGAP44Q17R89 818 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms