RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 JAM2P57087 298 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 DAOAP59103 153 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 BPIFB4P59827 614 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 POLR2FP61218 127 aaKnown RBP11.8□□□□□ -0.52
ERCC8-208ENST00000497892 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERCC8-208ENST00000497892 TNK2Q07912 1038 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 TADA2BQ86TJ2 420 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 TTC16Q8NEE8 873 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 CSGALNACT1Q8TDX6 532 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 STK32AQ8WU08 396 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 OSCP1Q8WVF1 389 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 HSFY1Q96LI6 401 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 CDK5RAP1Q96SZ6 601 aaKnown RBP11.8□□□□□ -0.52
ERCC8-208ENST00000497892 HPS4Q9NQG7 708 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 GKN1Q9NS71 199 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 GTSE1Q9NYZ3 720 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 CFAP97Q9P2B7 532 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 WNT6Q9Y6F9 365 aa11.8□□□□□ -0.52
ERCC8-208ENST00000497892 A0A1B0GTH6 734 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 KANSL1LA0AUZ9 987 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 YJEFN3A6XGL0 299 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 E7ENQ6 273 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 TBX18O95935 607 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 RALAP11233 206 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 LCP1P13796 627 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 ARSAP15289 507 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 CYP11B1P15538 503 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 IFNAR2P48551 515 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 VCPP55072 806 aaKnown RBP11.79□□□□□ -0.52
ERCC8-208ENST00000497892 TPM4P67936 248 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 PDCLQ13371 301 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 EML3Q32P44 896 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 ITPRIPL2Q3MIP1 535 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 C10orf120Q5SQS8 335 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 C1orf228Q6PIY5 440 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 TMEM105Q8N8V8 129 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 PJA1Q8NG27 643 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 IRGQQ8WZA9 623 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 ATP2A3Q93084 1043 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 PCMTD1Q96MG8 357 aaPredicted RBP11.79□□□□□ -0.52
ERCC8-208ENST00000497892 FOXQ1Q9C009 403 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 LHX5Q9H2C1 402 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 EBF3Q9H4W6 596 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 C8orf33Q9H7E9 229 aaPredicted RBP11.79□□□□□ -0.52
ERCC8-208ENST00000497892 NLRC4Q9NPP4 1024 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 DUS2Q9NX74 493 aaKnown RBP11.79□□□□□ -0.52
ERCC8-208ENST00000497892 CYTH4Q9UIA0 394 aa11.79□□□□□ -0.52
ERCC8-208ENST00000497892 E2F8A0AVK6 867 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 SPECC1L-ADORA2AF8WAN1 911 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 GOLGA6L19H0YKK7 550 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 PIK3R2O00459 728 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 MAN2B1O00754 1011 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 SLC9A3R1O14745 358 aaPredicted RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 TEX33O43247 280 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 FBXO21O94952 628 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 CD72P21854 359 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 CTHP32929 405 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 SOX5P35711 763 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 ACADSBP45954 432 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 SOX9P48436 509 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 RUNX3Q13761 415 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 FILIP1LQ4L180 1135 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 BSPRYQ5W0U4 402 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 ZNF852Q6ZMS4 543 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 TMEM110Q86TL2 294 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 RALGPS2Q86X27 583 aaPredicted RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 PASD1Q8IV76 773 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 CCDC105Q8IYK2 499 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 CPA6Q8N4T0 437 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 NDRG1Q92597 394 aaKnown RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 SPAG5Q96R06 1193 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 OSBPL6Q9BZF3 934 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 LTB4R2Q9NPC1 389 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 ST7Q9NRC1 585 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 NUDT5Q9UKK9 219 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 MRPS17Q9Y2R5 130 aaKnown RBP11.78□□□□□ -0.52
ERCC8-208ENST00000497892 KIAA1549LQ6ZVL6 1849 aa11.78□□□□□ -0.52
ERCC8-208ENST00000497892 WDFY4Q6ZS81 3184 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 A0A1W2PQC6 194 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 E5RJQ4 531 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 MDM4O15151 490 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 SART1O43290 800 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 PI15O43692 258 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 GREM1O60565 184 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 GFPT2O94808 682 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 NFATC1O95644 943 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 SERPINC1P01008 464 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 AVPR2P30518 371 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms