RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ZNF653Q96CK0 615 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 VPS50Q96JG6 964 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 KRT12Q99456 494 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 FAM118BQ9BPY3 351 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 NUP85Q9BW27 656 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 UBE2OQ9C0C9 1292 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 SMYD3Q9H7B4 428 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 RPF1Q9H9Y2 349 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 KIAA1586Q9HCI6 787 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CISHQ9NSE2 258 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 RNF186Q9NXI6 227 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 POLG2Q9UHN1 485 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TNFSF13BQ9Y275 285 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 EFR3BQ9Y2G0 817 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 NOSIPQ9Y314 301 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 A0A1W2PRQ8 180 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 MUSKO15146 869 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GPR32O75388 356 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 NPTXRO95502 500 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 F11P03951 625 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TMEM253P0C7T8 217 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GZMAP12544 262 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TCF4P15884 667 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 COMTP21964 271 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 NFKBIAP25963 317 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CCND3P30281 292 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 NOS2P35228 1153 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 PEX5P50542 639 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 PSMD7P51665 324 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 RPL7AP62424 266 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 LAPTM5Q13571 262 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 SUZ12Q15022 739 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 MAPRE1Q15691 268 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 FSCN1Q16658 493 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF699Q32M78 642 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 BBS9Q3SYG4 887 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 FBXO46Q6PJ61 603 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TMCO3Q6UWJ1 677 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 DDX42Q86XP3 938 aaKnown RBP eCLIP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CHPFQ8IZ52 775 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ZDHHC14Q8IZN3 488 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 GIPC2Q8TF65 315 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF606Q8WXB4 792 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ACSF2Q96CM8 615 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 HSH2DQ96JZ2 352 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CELF4Q9BZC1 486 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 SDCBP2Q9H190 292 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ISCUQ9H1K1 167 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 ADAMTS10Q9H324 1103 aa6.45□□□□□ -1.38
SSBP1-213ENST00000496622 CNOT8Q9UFF9 292 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 DDX20Q9UHI6 824 aaKnown RBP6.45□□□□□ -1.38
SSBP1-213ENST00000496622 TLDC2A0PJX2 215 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PMM2O15305 246 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 MAGEB2O15479 319 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 MGEA5O60502 916 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 FGGP02679 453 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 UNGP13051 313 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 GLULP15104 373 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 CD19P15391 556 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 TCP1P17987 556 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 POLR2BP30876 1174 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 GJC1P36383 396 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ASPAP45381 313 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 GPC5P78333 572 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 LACTBP83111 547 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 NOGQ13253 232 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 UBAP2LQ14157 1087 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 LONRF2Q1L5Z9 754 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ATP13A4Q4VNC1 1196 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 BEND6Q5SZJ8 279 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 CYP4A22Q5TCH4 519 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 TMEM53Q6P2H8 277 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 RSPH3Q86UC2 560 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 WDR49Q8IV35 697 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ACMSDQ8TDX5 336 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ZFAND2BQ8WV99 257 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 IMPG2Q9BZV3 1241 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 C2orf40Q9H1Z8 148 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PPCSQ9HAB8 311 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PREBQ9HCU5 417 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ERVK-5Q9HDB9 667 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PRMT7Q9NVM4 692 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 KLHL11Q9NVR0 708 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 AMACRQ9UHK6 382 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 INTUQ9ULD6 942 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 AGAP1Q9UPQ3 857 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PIN4Q9Y237 131 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PCDHB2Q9Y5E7 798 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 GAS2O43903 313 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 RGS2P41220 211 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PMS2P54278 862 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 PURAQ00577 322 aaKnown RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 POU5F1BQ06416 359 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ACTN3Q08043 901 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 CACNB2Q08289 660 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-213ENST00000496622 CFAP221Q4G0U5 840 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF618Q5T7W0 954 aa6.44□□□□□ -1.38
SSBP1-213ENST00000496622 GALNT15Q8N3T1 639 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms