RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 DHPSP49366 369 aaPredicted RBP13.63□□□□□ -0.23
FN1-226ENST00000496542 BECN1Q14457 450 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 NUDT18Q6ZVK8 323 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 CCDC186Q7Z3E2 898 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 TRMT11Q7Z4G4 463 aaKnown RBP13.63□□□□□ -0.23
FN1-226ENST00000496542 SCD5Q86SK9 330 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 TADA2BQ86TJ2 420 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 MIB1Q86YT6 1006 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 TTC39CQ8N584 583 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 SLC4A11Q8NBS3 891 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 TATDN2Q93075 761 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 BHMTQ93088 406 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 SPACA7Q96KW9 195 aa13.63□□□□□ -0.23
FN1-226ENST00000496542 PLXND1Q9Y4D7 1925 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 SLC16A3O15427 465 aaKnown RBP13.62□□□□□ -0.23
FN1-226ENST00000496542 ADRB1P08588 477 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 RALAP11233 206 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 TYRP14679 529 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 WASP42768 502 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 PLA2G4AP47712 749 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 PSEN1P49768 467 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 RAD23BP54727 409 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
FN1-226ENST00000496542 CBWD6Q4V339 395 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 CBWD3Q5JTY5 395 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 CBWD5Q5RIA9 395 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
FN1-226ENST00000496542 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 KLHDC10Q6PID8 442 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 OLIG1Q8TAK6 271 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 DDX1Q92499 740 aaKnown RBP13.62□□□□□ -0.23
FN1-226ENST00000496542 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 TMEM176AQ96HP8 235 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 GSDMAQ96QA5 445 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 XPO6Q96QU8 1125 aaKnown RBP13.62□□□□□ -0.23
FN1-226ENST00000496542 EDEM2Q9BV94 578 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 WDR35Q9P2L0 1181 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 RASAL2Q9UJF2 1139 aa13.62□□□□□ -0.23
FN1-226ENST00000496542 ASCC3Q8N3C0 2202 aaKnown RBP13.62□□□□□ -0.23
FN1-226ENST00000496542 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 MAP3K13O43283 966 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 CACNG3O60359 315 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 STC2O76061 302 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 HMBSP08397 361 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 HOXB2P14652 356 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 P2RY2P41231 377 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 PMS1P54277 932 aaKnown RBP13.61□□□□□ -0.23
FN1-226ENST00000496542 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
FN1-226ENST00000496542 EFEMP1Q12805 493 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 GOLGA7BQ2TAP0 167 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 EGFLAMQ63HQ2 1017 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 ARHGAP17Q68EM7 881 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 ANKRD40Q6AI12 368 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 Q6ZNB5 142 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 TOGARAM2Q6ZUX3 1019 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 LPCAT2Q7L5N7 544 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 PIGZQ86VD9 579 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 ENGASEQ8NFI3 743 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 PIGKQ92643 395 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 FAXDC2Q96IV6 333 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 CNTNAP3BQ96NU0 1288 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 CDK5RAP1Q96SZ6 601 aaKnown RBP13.61□□□□□ -0.23
FN1-226ENST00000496542 CNTNAP3Q9BZ76 1288 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 MARK1Q9P0L2 795 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 HCN2Q9UL51 889 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 USP3Q9Y6I4 520 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 CACNA1EQ15878 2313 aa13.61□□□□□ -0.23
FN1-226ENST00000496542 CEP192Q8TEP8 1941 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
FN1-226ENST00000496542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 NTSR1P30989 418 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 DGKGP49619 791 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 SLC8A3P57103 927 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 NUCB2P80303 420 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 CUL2Q13617 745 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 COBLL1Q53SF7 1204 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
FN1-226ENST00000496542 ZC3H3Q8IXZ2 948 aaKnown RBP13.6□□□□□ -0.23
FN1-226ENST00000496542 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 FRMD1Q8N878 549 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 CLIC5Q9NZA1 410 aa13.6□□□□□ -0.23
FN1-226ENST00000496542 ARMCX3Q9UH62 379 aaPredicted RBP13.6□□□□□ -0.23
FN1-226ENST00000496542 MBD1Q9UIS9 605 aaPredicted RBP13.6□□□□□ -0.23
FN1-226ENST00000496542 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
FN1-226ENST00000496542 LNP1A1A4G5 178 aa13.59□□□□□ -0.23
FN1-226ENST00000496542 C4orf47A7E2U8 309 aa13.59□□□□□ -0.23
FN1-226ENST00000496542 PATE3B3GLJ2 98 aa13.59□□□□□ -0.23
FN1-226ENST00000496542 PRRT4C9JH25 899 aa13.59□□□□□ -0.23
FN1-226ENST00000496542 KHNYNO15037 678 aaKnown RBP13.59□□□□□ -0.23
FN1-226ENST00000496542 CD19P15391 556 aa13.59□□□□□ -0.23
FN1-226ENST00000496542 GABRG2P18507 467 aa13.59□□□□□ -0.23
FN1-226ENST00000496542 CORO1AP31146 461 aaKnown RBP13.59□□□□□ -0.23
FN1-226ENST00000496542 TKTL1P51854 596 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms